Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRAP04437 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRAP04437 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRAP04437 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRAP04437 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRAP04437 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TCRAP04437 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRAP04437 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TCRAP04437 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRAP04437 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TCRAP04437 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC14.84□□□□□ -0.03
TCRAP04437 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRAP04437 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRAP04437 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TCRAP04437 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TCRAP04437 TERF1P5-201ENST00000477545 1207 ntBASIC14.84□□□□□ -0.03
TCRAP04437 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRAP04437 KRT18P14-201ENST00000534205 1250 ntBASIC14.84□□□□□ -0.03
TCRAP04437 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TCRAP04437 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRAP04437 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC14.84□□□□□ -0.03
TCRAP04437 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRAP04437 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TCRAP04437 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TCRAP04437 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TCRAP04437 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TCRAP04437 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TCRAP04437 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRAP04437 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRAP04437 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRAP04437 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRAP04437 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRAP04437 AL049812.1-201ENST00000432563 2267 ntBASIC14.83□□□□□ -0.03
TCRAP04437 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
TCRAP04437 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
TCRAP04437 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TCRAP04437 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TCRAP04437 AC006333.2-201ENST00000607957 2099 ntBASIC14.83□□□□□ -0.03
TCRAP04437 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRAP04437 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRAP04437 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRAP04437 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TCRAP04437 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRAP04437 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC14.83□□□□□ -0.04
TCRAP04437 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRAP04437 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TCRAP04437 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRAP04437 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRAP04437 PARP1-202ENST00000366792 553 ntTSL 3 BASIC14.83□□□□□ -0.04
TCRAP04437 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRAP04437 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRAP04437 YBX1P1-201ENST00000445822 960 ntBASIC14.83□□□□□ -0.04
TCRAP04437 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC14.83□□□□□ -0.04
TCRAP04437 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRAP04437 AL139246.5-201ENST00000606645 996 ntBASIC14.83□□□□□ -0.04
TCRAP04437 RALB-208ENST00000631312 311 ntTSL 5 BASIC14.83□□□□□ -0.04
TCRAP04437 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TCRAP04437 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRAP04437 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TCRAP04437 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TCRAP04437 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRAP04437 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRAP04437 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRAP04437 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRAP04437 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC14.83□□□□□ -0.04
TCRAP04437 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRAP04437 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC14.82□□□□□ -0.04
TCRAP04437 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TCRAP04437 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TCRAP04437 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.82□□□□□ -0.04
TCRAP04437 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TCRAP04437 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC14.82□□□□□ -0.04
TCRAP04437 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TCRAP04437 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
TCRAP04437 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.82□□□□□ -0.04
TCRAP04437 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TCRAP04437 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TCRAP04437 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TCRAP04437 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TCRAP04437 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TCRAP04437 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC14.82□□□□□ -0.04
TCRAP04437 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TCRAP04437 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TCRAP04437 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TCRAP04437 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TCRAP04437 MCRIP2P1-201ENST00000394346 511 ntBASIC14.82□□□□□ -0.04
TCRAP04437 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC14.82□□□□□ -0.04
TCRAP04437 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TCRAP04437 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC14.82□□□□□ -0.04
TCRAP04437 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC14.82□□□□□ -0.04
TCRAP04437 MFSD11-216ENST00000590393 1141 ntBASIC14.82□□□□□ -0.04
TCRAP04437 AC016405.3-201ENST00000607710 860 ntBASIC14.82□□□□□ -0.04
TCRAP04437 AC104581.1-202ENST00000635932 2618 ntBASIC14.82□□□□□ -0.04
TCRAP04437 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TCRAP04437 AC141586.3-201ENST00000562166 1838 ntBASIC14.82□□□□□ -0.04
TCRAP04437 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TCRAP04437 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
TCRAP04437 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TCRAP04437 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TCRAP04437 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms