Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.86■□□□□ 0.61
CLDN9O95484 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.86■□□□□ 0.61
CLDN9O95484 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.86■□□□□ 0.61
CLDN9O95484 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.86■□□□□ 0.61
CLDN9O95484 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN9O95484 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN9O95484 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN9O95484 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CLDN9O95484 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.86■□□□□ 0.61
CLDN9O95484 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CLDN9O95484 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN9O95484 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN9O95484 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
CLDN9O95484 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN9O95484 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CLDN9O95484 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN9O95484 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CLDN9O95484 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN9O95484 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.85■□□□□ 0.61
CLDN9O95484 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN9O95484 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN9O95484 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.85■□□□□ 0.61
CLDN9O95484 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN9O95484 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN9O95484 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.85■□□□□ 0.61
CLDN9O95484 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN9O95484 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN9O95484 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.85■□□□□ 0.61
CLDN9O95484 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN9O95484 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.85■□□□□ 0.61
CLDN9O95484 SOX15-203ENST00000570788 1093 ntBASIC18.85■□□□□ 0.61
CLDN9O95484 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.85■□□□□ 0.61
CLDN9O95484 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN9O95484 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN9O95484 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN9O95484 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
CLDN9O95484 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.85■□□□□ 0.61
CLDN9O95484 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN9O95484 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.85■□□□□ 0.61
CLDN9O95484 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN9O95484 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN9O95484 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
CLDN9O95484 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN9O95484 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN9O95484 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN9O95484 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN9O95484 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CLDN9O95484 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.84■□□□□ 0.61
CLDN9O95484 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN9O95484 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.84■□□□□ 0.61
CLDN9O95484 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN9O95484 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN9O95484 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN9O95484 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CLDN9O95484 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CLDN9O95484 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN9O95484 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN9O95484 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.84■□□□□ 0.61
CLDN9O95484 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN9O95484 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN9O95484 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN9O95484 AP000974.1-201ENST00000623909 2387 ntBASIC18.84■□□□□ 0.61
CLDN9O95484 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN9O95484 AC098818.2-201ENST00000564925 2320 ntBASIC18.84■□□□□ 0.61
CLDN9O95484 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CLDN9O95484 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
CLDN9O95484 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN9O95484 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CLDN9O95484 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.83■□□□□ 0.61
CLDN9O95484 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN9O95484 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN9O95484 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CLDN9O95484 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CLDN9O95484 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CLDN9O95484 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN9O95484 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN9O95484 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN9O95484 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN9O95484 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN9O95484 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.83■□□□□ 0.6
CLDN9O95484 YBX1P10-201ENST00000444752 975 ntBASIC18.83■□□□□ 0.6
CLDN9O95484 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.83■□□□□ 0.6
CLDN9O95484 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.83■□□□□ 0.6
CLDN9O95484 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CLDN9O95484 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.83■□□□□ 0.6
CLDN9O95484 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN9O95484 AC008687.6-201ENST00000596318 630 ntBASIC18.83■□□□□ 0.6
CLDN9O95484 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.83■□□□□ 0.6
CLDN9O95484 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.83■□□□□ 0.6
CLDN9O95484 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN9O95484 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN9O95484 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.83■□□□□ 0.6
CLDN9O95484 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN9O95484 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CLDN9O95484 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN9O95484 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN9O95484 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN9O95484 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.82■□□□□ 0.6
CLDN9O95484 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN9O95484 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms