Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TVP23AA6NH52 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TVP23AA6NH52 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TVP23AA6NH52 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.41■□□□□ 0.38
TVP23AA6NH52 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.41■□□□□ 0.38
TVP23AA6NH52 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TVP23AA6NH52 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TVP23AA6NH52 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TVP23AA6NH52 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TVP23AA6NH52 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TVP23AA6NH52 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TVP23AA6NH52 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
TVP23AA6NH52 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.4■□□□□ 0.38
TVP23AA6NH52 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TVP23AA6NH52 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TVP23AA6NH52 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TVP23AA6NH52 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TVP23AA6NH52 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
TVP23AA6NH52 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.4■□□□□ 0.38
TVP23AA6NH52 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TVP23AA6NH52 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TVP23AA6NH52 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.4■□□□□ 0.38
TVP23AA6NH52 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TVP23AA6NH52 CROCCP5-201ENST00000436658 830 ntBASIC17.4■□□□□ 0.38
TVP23AA6NH52 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TVP23AA6NH52 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.4■□□□□ 0.38
TVP23AA6NH52 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.4■□□□□ 0.38
TVP23AA6NH52 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TVP23AA6NH52 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TVP23AA6NH52 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TVP23AA6NH52 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.4■□□□□ 0.38
TVP23AA6NH52 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
TVP23AA6NH52 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
TVP23AA6NH52 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TVP23AA6NH52 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.4■□□□□ 0.38
TVP23AA6NH52 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TVP23AA6NH52 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TVP23AA6NH52 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TVP23AA6NH52 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.39■□□□□ 0.37
TVP23AA6NH52 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.39■□□□□ 0.37
TVP23AA6NH52 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.39■□□□□ 0.37
TVP23AA6NH52 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.39■□□□□ 0.37
TVP23AA6NH52 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TVP23AA6NH52 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.39■□□□□ 0.37
TVP23AA6NH52 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.39■□□□□ 0.37
TVP23AA6NH52 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.39■□□□□ 0.37
TVP23AA6NH52 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.39■□□□□ 0.37
TVP23AA6NH52 RAP2CP1-201ENST00000605103 478 ntBASIC17.39■□□□□ 0.37
TVP23AA6NH52 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.39■□□□□ 0.37
TVP23AA6NH52 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TVP23AA6NH52 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.39■□□□□ 0.37
TVP23AA6NH52 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.39■□□□□ 0.37
TVP23AA6NH52 AC116351.2-201ENST00000606540 1585 ntBASIC17.39■□□□□ 0.37
TVP23AA6NH52 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TVP23AA6NH52 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TVP23AA6NH52 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.39■□□□□ 0.37
TVP23AA6NH52 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
TVP23AA6NH52 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TVP23AA6NH52 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TVP23AA6NH52 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TVP23AA6NH52 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TVP23AA6NH52 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TVP23AA6NH52 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TVP23AA6NH52 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TVP23AA6NH52 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TVP23AA6NH52 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TVP23AA6NH52 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TVP23AA6NH52 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TVP23AA6NH52 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TVP23AA6NH52 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TVP23AA6NH52 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TVP23AA6NH52 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TVP23AA6NH52 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.38■□□□□ 0.37
TVP23AA6NH52 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.38■□□□□ 0.37
TVP23AA6NH52 MIR935-201ENST00000401179 91 ntBASIC17.38■□□□□ 0.37
TVP23AA6NH52 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.38■□□□□ 0.37
TVP23AA6NH52 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.38■□□□□ 0.37
TVP23AA6NH52 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.38■□□□□ 0.37
TVP23AA6NH52 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.38■□□□□ 0.37
TVP23AA6NH52 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TVP23AA6NH52 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TVP23AA6NH52 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.38■□□□□ 0.37
TVP23AA6NH52 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TVP23AA6NH52 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TVP23AA6NH52 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TVP23AA6NH52 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TVP23AA6NH52 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TVP23AA6NH52 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TVP23AA6NH52 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.38■□□□□ 0.37
TVP23AA6NH52 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TVP23AA6NH52 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.37■□□□□ 0.37
TVP23AA6NH52 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.37■□□□□ 0.37
TVP23AA6NH52 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TVP23AA6NH52 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
TVP23AA6NH52 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
TVP23AA6NH52 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TVP23AA6NH52 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TVP23AA6NH52 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TVP23AA6NH52 MIPEPP3-201ENST00000412105 444 ntBASIC17.37■□□□□ 0.37
TVP23AA6NH52 AL390719.1-204ENST00000412397 1219 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms