Protein–RNA interactions for Protein: Q9Y6M7

SLC4A7, Sodium bicarbonate cotransporter 3, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A7Q9Y6M7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC28.22■■■□□ 2.11
SLC4A7Q9Y6M7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC28.22■■■□□ 2.11
SLC4A7Q9Y6M7 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
SLC4A7Q9Y6M7 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC28.22■■■□□ 2.11
SLC4A7Q9Y6M7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC28.21■■■□□ 2.11
SLC4A7Q9Y6M7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SLC4A7Q9Y6M7 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC28.21■■■□□ 2.11
SLC4A7Q9Y6M7 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.11
SLC4A7Q9Y6M7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SLC4A7Q9Y6M7 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
SLC4A7Q9Y6M7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC28.18■■■□□ 2.1
SLC4A7Q9Y6M7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SLC4A7Q9Y6M7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SLC4A7Q9Y6M7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SLC4A7Q9Y6M7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
SLC4A7Q9Y6M7 AC010864.1-201ENST00000609407 1511 ntBASIC28.17■■■□□ 2.1
SLC4A7Q9Y6M7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SLC4A7Q9Y6M7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC28.16■■■□□ 2.1
SLC4A7Q9Y6M7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC28.16■■■□□ 2.1
SLC4A7Q9Y6M7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC28.16■■■□□ 2.1
SLC4A7Q9Y6M7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC28.16■■■□□ 2.1
SLC4A7Q9Y6M7 AL161658.1-201ENST00000623641 1967 ntBASIC28.16■■■□□ 2.1
SLC4A7Q9Y6M7 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
SLC4A7Q9Y6M7 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SLC4A7Q9Y6M7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC28.15■■■□□ 2.1
SLC4A7Q9Y6M7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
SLC4A7Q9Y6M7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
SLC4A7Q9Y6M7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC28.14■■■□□ 2.09
SLC4A7Q9Y6M7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC28.13■■■□□ 2.09
SLC4A7Q9Y6M7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
SLC4A7Q9Y6M7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
SLC4A7Q9Y6M7 TSPY13P-201ENST00000338964 914 ntBASIC28.12■■■□□ 2.09
SLC4A7Q9Y6M7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC28.12■■■□□ 2.09
SLC4A7Q9Y6M7 AC060814.1-201ENST00000554326 538 ntBASIC28.12■■■□□ 2.09
SLC4A7Q9Y6M7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC28.12■■■□□ 2.09
SLC4A7Q9Y6M7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
SLC4A7Q9Y6M7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
SLC4A7Q9Y6M7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC28.1■■■□□ 2.09
SLC4A7Q9Y6M7 GFER-205ENST00000569451 517 ntTSL 5 BASIC28.1■■■□□ 2.09
SLC4A7Q9Y6M7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
SLC4A7Q9Y6M7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
SLC4A7Q9Y6M7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC28.09■■■□□ 2.09
SLC4A7Q9Y6M7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
SLC4A7Q9Y6M7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
SLC4A7Q9Y6M7 AC004987.1-201ENST00000428627 508 ntBASIC28.06■■■□□ 2.08
SLC4A7Q9Y6M7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
SLC4A7Q9Y6M7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC28.05■■■□□ 2.08
SLC4A7Q9Y6M7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SLC4A7Q9Y6M7 KRT18P60-201ENST00000312876 1297 ntBASIC28.05■■■□□ 2.08
SLC4A7Q9Y6M7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SLC4A7Q9Y6M7 ATP5G2P3-201ENST00000429083 425 ntBASIC28.05■■■□□ 2.08
SLC4A7Q9Y6M7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC28.05■■■□□ 2.08
SLC4A7Q9Y6M7 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
SLC4A7Q9Y6M7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC28.04■■■□□ 2.08
SLC4A7Q9Y6M7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
SLC4A7Q9Y6M7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
SLC4A7Q9Y6M7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC28.04■■■□□ 2.08
SLC4A7Q9Y6M7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC28.04■■■□□ 2.08
SLC4A7Q9Y6M7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
SLC4A7Q9Y6M7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC28.03■■■□□ 2.08
SLC4A7Q9Y6M7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
SLC4A7Q9Y6M7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC28.03■■■□□ 2.08
SLC4A7Q9Y6M7 AC148477.6-201ENST00000623746 465 ntBASIC28.03■■■□□ 2.08
SLC4A7Q9Y6M7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
SLC4A7Q9Y6M7 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC28.02■■■□□ 2.08
SLC4A7Q9Y6M7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
SLC4A7Q9Y6M7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC28.01■■■□□ 2.07
SLC4A7Q9Y6M7 WHAMMP2-203ENST00000563942 1603 ntBASIC28.01■■■□□ 2.07
SLC4A7Q9Y6M7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
SLC4A7Q9Y6M7 RARRES2P1-201ENST00000474487 481 ntBASIC28.01■■■□□ 2.07
SLC4A7Q9Y6M7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC28.01■■■□□ 2.07
SLC4A7Q9Y6M7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
SLC4A7Q9Y6M7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC28.01■■■□□ 2.07
SLC4A7Q9Y6M7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC28.01■■■□□ 2.07
SLC4A7Q9Y6M7 AC135983.2-203ENST00000454486 1613 ntBASIC28■■■□□ 2.07
SLC4A7Q9Y6M7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
SLC4A7Q9Y6M7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
SLC4A7Q9Y6M7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC28■■■□□ 2.07
SLC4A7Q9Y6M7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
SLC4A7Q9Y6M7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC27.99■■■□□ 2.07
SLC4A7Q9Y6M7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
SLC4A7Q9Y6M7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC27.99■■■□□ 2.07
SLC4A7Q9Y6M7 AC110285.7-201ENST00000624417 1536 ntBASIC27.98■■■□□ 2.07
SLC4A7Q9Y6M7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
SLC4A7Q9Y6M7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC27.98■■■□□ 2.07
SLC4A7Q9Y6M7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
SLC4A7Q9Y6M7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.97■■■□□ 2.07
SLC4A7Q9Y6M7 AC127502.1-201ENST00000399971 1502 ntBASIC27.97■■■□□ 2.07
SLC4A7Q9Y6M7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC27.97■■■□□ 2.07
SLC4A7Q9Y6M7 AC092296.2-201ENST00000589470 999 ntBASIC27.96■■■□□ 2.07
SLC4A7Q9Y6M7 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC27.95■■■□□ 2.07
SLC4A7Q9Y6M7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC27.95■■■□□ 2.07
SLC4A7Q9Y6M7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC27.95■■■□□ 2.07
SLC4A7Q9Y6M7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC27.95■■■□□ 2.06
SLC4A7Q9Y6M7 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC27.94■■■□□ 2.06
SLC4A7Q9Y6M7 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
SLC4A7Q9Y6M7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
SLC4A7Q9Y6M7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC27.94■■■□□ 2.06
SLC4A7Q9Y6M7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC27.94■■■□□ 2.06
SLC4A7Q9Y6M7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms