Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
HCFC2Q9Y5Z7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
HCFC2Q9Y5Z7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
HCFC2Q9Y5Z7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
HCFC2Q9Y5Z7 AC012354.3-201ENST00000623734 483 ntBASIC27.34■■□□□ 1.97
HCFC2Q9Y5Z7 AC127502.1-201ENST00000399971 1502 ntBASIC27.34■■□□□ 1.97
HCFC2Q9Y5Z7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
HCFC2Q9Y5Z7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
HCFC2Q9Y5Z7 AC135983.2-203ENST00000454486 1613 ntBASIC27.32■■□□□ 1.96
HCFC2Q9Y5Z7 WHAMMP2-203ENST00000563942 1603 ntBASIC27.32■■□□□ 1.96
HCFC2Q9Y5Z7 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
HCFC2Q9Y5Z7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
HCFC2Q9Y5Z7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
HCFC2Q9Y5Z7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC27.31■■□□□ 1.96
HCFC2Q9Y5Z7 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
HCFC2Q9Y5Z7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC27.31■■□□□ 1.96
HCFC2Q9Y5Z7 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC27.3■■□□□ 1.96
HCFC2Q9Y5Z7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
HCFC2Q9Y5Z7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
HCFC2Q9Y5Z7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
HCFC2Q9Y5Z7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC27.3■■□□□ 1.96
HCFC2Q9Y5Z7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
HCFC2Q9Y5Z7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
HCFC2Q9Y5Z7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC27.28■■□□□ 1.96
HCFC2Q9Y5Z7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC27.28■■□□□ 1.96
HCFC2Q9Y5Z7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
HCFC2Q9Y5Z7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
HCFC2Q9Y5Z7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
HCFC2Q9Y5Z7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
HCFC2Q9Y5Z7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC27.25■■□□□ 1.95
HCFC2Q9Y5Z7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC27.25■■□□□ 1.95
HCFC2Q9Y5Z7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
HCFC2Q9Y5Z7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
HCFC2Q9Y5Z7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
HCFC2Q9Y5Z7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
HCFC2Q9Y5Z7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
HCFC2Q9Y5Z7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
HCFC2Q9Y5Z7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
HCFC2Q9Y5Z7 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
HCFC2Q9Y5Z7 AC110285.7-201ENST00000624417 1536 ntBASIC27.21■■□□□ 1.95
HCFC2Q9Y5Z7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC27.19■■□□□ 1.94
HCFC2Q9Y5Z7 AC060814.1-201ENST00000554326 538 ntBASIC27.19■■□□□ 1.94
HCFC2Q9Y5Z7 AC148477.6-201ENST00000623746 465 ntBASIC27.19■■□□□ 1.94
HCFC2Q9Y5Z7 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
HCFC2Q9Y5Z7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
HCFC2Q9Y5Z7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC27.19■■□□□ 1.94
HCFC2Q9Y5Z7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
HCFC2Q9Y5Z7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC27.18■■□□□ 1.94
HCFC2Q9Y5Z7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC27.18■■□□□ 1.94
HCFC2Q9Y5Z7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
HCFC2Q9Y5Z7 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
HCFC2Q9Y5Z7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
HCFC2Q9Y5Z7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
HCFC2Q9Y5Z7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
HCFC2Q9Y5Z7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC27.16■■□□□ 1.94
HCFC2Q9Y5Z7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
HCFC2Q9Y5Z7 U85056.1-201ENST00000616429 682 ntBASIC27.16■■□□□ 1.94
HCFC2Q9Y5Z7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
HCFC2Q9Y5Z7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
HCFC2Q9Y5Z7 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
HCFC2Q9Y5Z7 AL033527.3-201ENST00000566366 1196 ntBASIC27.15■■□□□ 1.94
HCFC2Q9Y5Z7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
HCFC2Q9Y5Z7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
HCFC2Q9Y5Z7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC27.15■■□□□ 1.94
HCFC2Q9Y5Z7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
HCFC2Q9Y5Z7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
HCFC2Q9Y5Z7 AC018358.1-201ENST00000631079 1402 ntBASIC27.14■■□□□ 1.93
HCFC2Q9Y5Z7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC27.13■■□□□ 1.93
HCFC2Q9Y5Z7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
HCFC2Q9Y5Z7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
HCFC2Q9Y5Z7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
HCFC2Q9Y5Z7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
HCFC2Q9Y5Z7 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC27.11■■□□□ 1.93
HCFC2Q9Y5Z7 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
HCFC2Q9Y5Z7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC27.11■■□□□ 1.93
HCFC2Q9Y5Z7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC27.1■■□□□ 1.93
HCFC2Q9Y5Z7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
HCFC2Q9Y5Z7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
HCFC2Q9Y5Z7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC27.09■■□□□ 1.93
HCFC2Q9Y5Z7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
HCFC2Q9Y5Z7 MIR219A2-201ENST00000608502 1504 ntBASIC27.09■■□□□ 1.93
HCFC2Q9Y5Z7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
HCFC2Q9Y5Z7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC27.08■■□□□ 1.93
HCFC2Q9Y5Z7 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC27.08■■□□□ 1.93
HCFC2Q9Y5Z7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC27.07■■□□□ 1.92
HCFC2Q9Y5Z7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
HCFC2Q9Y5Z7 AL135925.1-201ENST00000605920 1701 ntBASIC27.07■■□□□ 1.92
HCFC2Q9Y5Z7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC27.06■■□□□ 1.92
HCFC2Q9Y5Z7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC27.05■■□□□ 1.92
HCFC2Q9Y5Z7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
HCFC2Q9Y5Z7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
HCFC2Q9Y5Z7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
HCFC2Q9Y5Z7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
HCFC2Q9Y5Z7 AC092296.2-201ENST00000589470 999 ntBASIC27.04■■□□□ 1.92
HCFC2Q9Y5Z7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
HCFC2Q9Y5Z7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
HCFC2Q9Y5Z7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
HCFC2Q9Y5Z7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
HCFC2Q9Y5Z7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
HCFC2Q9Y5Z7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC27.02■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms