Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHGC3Q9UN70 AC021231.2-201ENST00000594613 730 ntBASIC27.25■■□□□ 1.95
PCDHGC3Q9UN70 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHGC3Q9UN70 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHGC3Q9UN70 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHGC3Q9UN70 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.24■■□□□ 1.95
PCDHGC3Q9UN70 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHGC3Q9UN70 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHGC3Q9UN70 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC27.24■■□□□ 1.95
PCDHGC3Q9UN70 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHGC3Q9UN70 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHGC3Q9UN70 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHGC3Q9UN70 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHGC3Q9UN70 DUX4L29-201ENST00000425409 679 ntBASIC27.23■■□□□ 1.95
PCDHGC3Q9UN70 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
PCDHGC3Q9UN70 AC100797.4-201ENST00000631653 1827 ntBASIC27.23■■□□□ 1.95
PCDHGC3Q9UN70 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PCDHGC3Q9UN70 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.22■■□□□ 1.95
PCDHGC3Q9UN70 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.22■■□□□ 1.95
PCDHGC3Q9UN70 MEST-211ENST00000437945 1455 ntTSL 5 BASIC27.22■■□□□ 1.95
PCDHGC3Q9UN70 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
PCDHGC3Q9UN70 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
PCDHGC3Q9UN70 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
PCDHGC3Q9UN70 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PCDHGC3Q9UN70 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHGC3Q9UN70 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHGC3Q9UN70 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHGC3Q9UN70 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
PCDHGC3Q9UN70 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC27.2■■□□□ 1.95
PCDHGC3Q9UN70 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
PCDHGC3Q9UN70 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
PCDHGC3Q9UN70 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
PCDHGC3Q9UN70 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
PCDHGC3Q9UN70 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC27.2■■□□□ 1.94
PCDHGC3Q9UN70 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
PCDHGC3Q9UN70 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHGC3Q9UN70 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCDHGC3Q9UN70 AC142086.6-201ENST00000621154 1765 ntBASIC27.18■■□□□ 1.94
PCDHGC3Q9UN70 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
PCDHGC3Q9UN70 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC27.18■■□□□ 1.94
PCDHGC3Q9UN70 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC27.18■■□□□ 1.94
PCDHGC3Q9UN70 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
PCDHGC3Q9UN70 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHGC3Q9UN70 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC27.17■■□□□ 1.94
PCDHGC3Q9UN70 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.17■■□□□ 1.94
PCDHGC3Q9UN70 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHGC3Q9UN70 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHGC3Q9UN70 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHGC3Q9UN70 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
PCDHGC3Q9UN70 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC27.15■■□□□ 1.94
PCDHGC3Q9UN70 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC27.15■■□□□ 1.94
PCDHGC3Q9UN70 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC27.15■■□□□ 1.94
PCDHGC3Q9UN70 PROC-203ENST00000409048 1586 ntTSL 5 BASIC27.14■■□□□ 1.94
PCDHGC3Q9UN70 HGH1-207ENST00000628266 258 ntTSL 5 BASIC27.14■■□□□ 1.94
PCDHGC3Q9UN70 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC27.14■■□□□ 1.93
PCDHGC3Q9UN70 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC27.13■■□□□ 1.93
PCDHGC3Q9UN70 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC27.13■■□□□ 1.93
PCDHGC3Q9UN70 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCDHGC3Q9UN70 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC27.13■■□□□ 1.93
PCDHGC3Q9UN70 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC27.12■■□□□ 1.93
PCDHGC3Q9UN70 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC27.12■■□□□ 1.93
PCDHGC3Q9UN70 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.12■■□□□ 1.93
PCDHGC3Q9UN70 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHGC3Q9UN70 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC27.11■■□□□ 1.93
PCDHGC3Q9UN70 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC27.11■■□□□ 1.93
PCDHGC3Q9UN70 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC27.11■■□□□ 1.93
PCDHGC3Q9UN70 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC27.11■■□□□ 1.93
PCDHGC3Q9UN70 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC27.1■■□□□ 1.93
PCDHGC3Q9UN70 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
PCDHGC3Q9UN70 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC27.1■■□□□ 1.93
PCDHGC3Q9UN70 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
PCDHGC3Q9UN70 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
PCDHGC3Q9UN70 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC27.09■■□□□ 1.93
PCDHGC3Q9UN70 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC27.09■■□□□ 1.93
PCDHGC3Q9UN70 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHGC3Q9UN70 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHGC3Q9UN70 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHGC3Q9UN70 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHGC3Q9UN70 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC27.08■■□□□ 1.92
PCDHGC3Q9UN70 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
PCDHGC3Q9UN70 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PCDHGC3Q9UN70 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC27.07■■□□□ 1.92
PCDHGC3Q9UN70 MLEC-202ENST00000412616 841 ntTSL 3 BASIC27.06■■□□□ 1.92
PCDHGC3Q9UN70 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PCDHGC3Q9UN70 AP002414.2-202ENST00000590929 1450 ntBASIC27.05■■□□□ 1.92
PCDHGC3Q9UN70 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC27.04■■□□□ 1.92
PCDHGC3Q9UN70 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHGC3Q9UN70 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHGC3Q9UN70 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHGC3Q9UN70 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC27.04■■□□□ 1.92
PCDHGC3Q9UN70 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHGC3Q9UN70 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
PCDHGC3Q9UN70 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
PCDHGC3Q9UN70 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC27.03■■□□□ 1.92
PCDHGC3Q9UN70 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PCDHGC3Q9UN70 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
PCDHGC3Q9UN70 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
PCDHGC3Q9UN70 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
PCDHGC3Q9UN70 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
PCDHGC3Q9UN70 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms