Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
LRTM1Q9HBL6 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
LRTM1Q9HBL6 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
LRTM1Q9HBL6 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
LRTM1Q9HBL6 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.53
LRTM1Q9HBL6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.64■■□□□ 1.53
LRTM1Q9HBL6 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.63■■□□□ 1.53
LRTM1Q9HBL6 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.63■■□□□ 1.53
LRTM1Q9HBL6 AC005559.1-201ENST00000589661 871 ntBASIC24.63■■□□□ 1.53
LRTM1Q9HBL6 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.63■■□□□ 1.53
LRTM1Q9HBL6 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LRTM1Q9HBL6 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LRTM1Q9HBL6 HNRNPLP2-201ENST00000568980 1570 ntBASIC24.62■■□□□ 1.53
LRTM1Q9HBL6 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
LRTM1Q9HBL6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
LRTM1Q9HBL6 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
LRTM1Q9HBL6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
LRTM1Q9HBL6 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
LRTM1Q9HBL6 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.6■■□□□ 1.53
LRTM1Q9HBL6 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
LRTM1Q9HBL6 AC100797.4-201ENST00000631653 1827 ntBASIC24.59■■□□□ 1.53
LRTM1Q9HBL6 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
LRTM1Q9HBL6 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
LRTM1Q9HBL6 BX255925.1-201ENST00000566954 1854 ntBASIC24.59■■□□□ 1.53
LRTM1Q9HBL6 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.59■■□□□ 1.53
LRTM1Q9HBL6 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
LRTM1Q9HBL6 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
LRTM1Q9HBL6 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.57■■□□□ 1.52
LRTM1Q9HBL6 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
LRTM1Q9HBL6 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
LRTM1Q9HBL6 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
LRTM1Q9HBL6 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.56■■□□□ 1.52
LRTM1Q9HBL6 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
LRTM1Q9HBL6 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
LRTM1Q9HBL6 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
LRTM1Q9HBL6 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
LRTM1Q9HBL6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.55■■□□□ 1.52
LRTM1Q9HBL6 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
LRTM1Q9HBL6 AL121749.1-202ENST00000609313 2153 ntBASIC24.54■■□□□ 1.52
LRTM1Q9HBL6 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
LRTM1Q9HBL6 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
LRTM1Q9HBL6 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
LRTM1Q9HBL6 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.54■■□□□ 1.52
LRTM1Q9HBL6 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
LRTM1Q9HBL6 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
LRTM1Q9HBL6 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
LRTM1Q9HBL6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
LRTM1Q9HBL6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
LRTM1Q9HBL6 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
LRTM1Q9HBL6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
LRTM1Q9HBL6 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.52■■□□□ 1.52
LRTM1Q9HBL6 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
LRTM1Q9HBL6 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
LRTM1Q9HBL6 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.51■■□□□ 1.51
LRTM1Q9HBL6 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
LRTM1Q9HBL6 AC108673.1-201ENST00000510422 1159 ntBASIC24.51■■□□□ 1.51
LRTM1Q9HBL6 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
LRTM1Q9HBL6 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
LRTM1Q9HBL6 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
LRTM1Q9HBL6 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
LRTM1Q9HBL6 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
LRTM1Q9HBL6 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
LRTM1Q9HBL6 LINC01003-201ENST00000564834 1764 ntBASIC24.49■■□□□ 1.51
LRTM1Q9HBL6 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
LRTM1Q9HBL6 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
LRTM1Q9HBL6 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
LRTM1Q9HBL6 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
LRTM1Q9HBL6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.47■■□□□ 1.51
LRTM1Q9HBL6 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
LRTM1Q9HBL6 DUX4L28-201ENST00000623687 678 ntBASIC24.47■■□□□ 1.51
LRTM1Q9HBL6 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
LRTM1Q9HBL6 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
LRTM1Q9HBL6 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.47■■□□□ 1.51
LRTM1Q9HBL6 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.46■■□□□ 1.51
LRTM1Q9HBL6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.46■■□□□ 1.51
LRTM1Q9HBL6 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.46■■□□□ 1.51
LRTM1Q9HBL6 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
LRTM1Q9HBL6 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
LRTM1Q9HBL6 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.45■■□□□ 1.5
LRTM1Q9HBL6 MIR6090-201ENST00000622481 60 ntBASIC24.45■■□□□ 1.5
LRTM1Q9HBL6 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.45■■□□□ 1.5
LRTM1Q9HBL6 AP002414.2-202ENST00000590929 1450 ntBASIC24.45■■□□□ 1.5
LRTM1Q9HBL6 AC135983.2-203ENST00000454486 1613 ntBASIC24.44■■□□□ 1.5
LRTM1Q9HBL6 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC24.44■■□□□ 1.5
LRTM1Q9HBL6 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.44■■□□□ 1.5
LRTM1Q9HBL6 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
LRTM1Q9HBL6 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
LRTM1Q9HBL6 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
LRTM1Q9HBL6 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
LRTM1Q9HBL6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.43■■□□□ 1.5
LRTM1Q9HBL6 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.43■■□□□ 1.5
LRTM1Q9HBL6 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.43■■□□□ 1.5
LRTM1Q9HBL6 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
LRTM1Q9HBL6 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.43■■□□□ 1.5
LRTM1Q9HBL6 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
LRTM1Q9HBL6 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LRTM1Q9HBL6 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LRTM1Q9HBL6 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LRTM1Q9HBL6 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
LRTM1Q9HBL6 MIR3665-201ENST00000578708 105 ntBASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms