Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ALX4Q9H161 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ALX4Q9H161 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ALX4Q9H161 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ALX4Q9H161 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ALX4Q9H161 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.6■■□□□ 1.05
ALX4Q9H161 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
ALX4Q9H161 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.6■■□□□ 1.05
ALX4Q9H161 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
ALX4Q9H161 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.6■■□□□ 1.05
ALX4Q9H161 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ALX4Q9H161 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
ALX4Q9H161 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.59■■□□□ 1.05
ALX4Q9H161 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ALX4Q9H161 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
ALX4Q9H161 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.58■■□□□ 1.05
ALX4Q9H161 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ALX4Q9H161 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ALX4Q9H161 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.57■■□□□ 1.04
ALX4Q9H161 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ALX4Q9H161 LINC01003-201ENST00000564834 1764 ntBASIC21.57■■□□□ 1.04
ALX4Q9H161 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.57■■□□□ 1.04
ALX4Q9H161 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ALX4Q9H161 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ALX4Q9H161 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ALX4Q9H161 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
ALX4Q9H161 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ALX4Q9H161 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ALX4Q9H161 AP004833.2-201ENST00000532228 1454 ntBASIC21.55■■□□□ 1.04
ALX4Q9H161 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ALX4Q9H161 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ALX4Q9H161 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.55■■□□□ 1.04
ALX4Q9H161 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ALX4Q9H161 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ALX4Q9H161 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
ALX4Q9H161 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ALX4Q9H161 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.54■■□□□ 1.04
ALX4Q9H161 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ALX4Q9H161 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.54■■□□□ 1.04
ALX4Q9H161 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ALX4Q9H161 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ALX4Q9H161 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.53■■□□□ 1.04
ALX4Q9H161 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.53■■□□□ 1.04
ALX4Q9H161 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ALX4Q9H161 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ALX4Q9H161 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ALX4Q9H161 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ALX4Q9H161 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
ALX4Q9H161 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
ALX4Q9H161 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ALX4Q9H161 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
ALX4Q9H161 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ALX4Q9H161 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ALX4Q9H161 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ALX4Q9H161 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
ALX4Q9H161 SETD8P1-201ENST00000623146 1180 ntBASIC21.5■■□□□ 1.03
ALX4Q9H161 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ALX4Q9H161 AC091060.1-201ENST00000623524 1766 ntBASIC21.49■■□□□ 1.03
ALX4Q9H161 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ALX4Q9H161 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ALX4Q9H161 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.49■■□□□ 1.03
ALX4Q9H161 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ALX4Q9H161 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ALX4Q9H161 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.49■■□□□ 1.03
ALX4Q9H161 AC010864.1-201ENST00000609407 1511 ntBASIC21.49■■□□□ 1.03
ALX4Q9H161 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.48■■□□□ 1.03
ALX4Q9H161 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
ALX4Q9H161 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.47■■□□□ 1.03
ALX4Q9H161 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ALX4Q9H161 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
ALX4Q9H161 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ALX4Q9H161 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.46■■□□□ 1.03
ALX4Q9H161 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ALX4Q9H161 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ALX4Q9H161 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.45■■□□□ 1.02
ALX4Q9H161 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.45■■□□□ 1.02
ALX4Q9H161 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ALX4Q9H161 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.44■■□□□ 1.02
ALX4Q9H161 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21.44■■□□□ 1.02
ALX4Q9H161 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ALX4Q9H161 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ALX4Q9H161 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
ALX4Q9H161 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
ALX4Q9H161 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ALX4Q9H161 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
ALX4Q9H161 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.41■■□□□ 1.02
ALX4Q9H161 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.41■■□□□ 1.02
ALX4Q9H161 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.41■■□□□ 1.02
ALX4Q9H161 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ALX4Q9H161 AC097358.2-201ENST00000607541 1159 ntBASIC21.41■■□□□ 1.02
ALX4Q9H161 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
ALX4Q9H161 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ALX4Q9H161 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
ALX4Q9H161 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
ALX4Q9H161 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.4■■□□□ 1.02
ALX4Q9H161 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.39■■□□□ 1.02
ALX4Q9H161 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
ALX4Q9H161 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ALX4Q9H161 AC020928.2-201ENST00000588717 2197 ntBASIC21.39■■□□□ 1.01
ALX4Q9H161 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms