Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.71■■□□□ 1.87
DDX47Q9H0S4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
DDX47Q9H0S4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.7■■□□□ 1.87
DDX47Q9H0S4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
DDX47Q9H0S4 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
DDX47Q9H0S4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
DDX47Q9H0S4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.69■■□□□ 1.86
DDX47Q9H0S4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.69■■□□□ 1.86
DDX47Q9H0S4 LINC01003-201ENST00000564834 1764 ntBASIC26.69■■□□□ 1.86
DDX47Q9H0S4 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
DDX47Q9H0S4 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.68■■□□□ 1.86
DDX47Q9H0S4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
DDX47Q9H0S4 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
DDX47Q9H0S4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
DDX47Q9H0S4 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
DDX47Q9H0S4 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
DDX47Q9H0S4 SETD8P1-201ENST00000623146 1180 ntBASIC26.67■■□□□ 1.86
DDX47Q9H0S4 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
DDX47Q9H0S4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.67■■□□□ 1.86
DDX47Q9H0S4 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.67■■□□□ 1.86
DDX47Q9H0S4 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
DDX47Q9H0S4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.66■■□□□ 1.86
DDX47Q9H0S4 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
DDX47Q9H0S4 RARRES2P7-201ENST00000567349 469 ntBASIC26.66■■□□□ 1.86
DDX47Q9H0S4 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
DDX47Q9H0S4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
DDX47Q9H0S4 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
DDX47Q9H0S4 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
DDX47Q9H0S4 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
DDX47Q9H0S4 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.65■■□□□ 1.86
DDX47Q9H0S4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.65■■□□□ 1.86
DDX47Q9H0S4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
DDX47Q9H0S4 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
DDX47Q9H0S4 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.64■■□□□ 1.86
DDX47Q9H0S4 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
DDX47Q9H0S4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
DDX47Q9H0S4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.63■■□□□ 1.85
DDX47Q9H0S4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
DDX47Q9H0S4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
DDX47Q9H0S4 AC100797.4-201ENST00000631653 1827 ntBASIC26.61■■□□□ 1.85
DDX47Q9H0S4 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26.61■■□□□ 1.85
DDX47Q9H0S4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
DDX47Q9H0S4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.61■■□□□ 1.85
DDX47Q9H0S4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.6■■□□□ 1.85
DDX47Q9H0S4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.6■■□□□ 1.85
DDX47Q9H0S4 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
DDX47Q9H0S4 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.6■■□□□ 1.85
DDX47Q9H0S4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
DDX47Q9H0S4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.59■■□□□ 1.85
DDX47Q9H0S4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.59■■□□□ 1.85
DDX47Q9H0S4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
DDX47Q9H0S4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
DDX47Q9H0S4 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.57■■□□□ 1.84
DDX47Q9H0S4 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
DDX47Q9H0S4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
DDX47Q9H0S4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
DDX47Q9H0S4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.56■■□□□ 1.84
DDX47Q9H0S4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
DDX47Q9H0S4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
DDX47Q9H0S4 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC26.54■■□□□ 1.84
DDX47Q9H0S4 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
DDX47Q9H0S4 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.54■■□□□ 1.84
DDX47Q9H0S4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
DDX47Q9H0S4 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
DDX47Q9H0S4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.54■■□□□ 1.84
DDX47Q9H0S4 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
DDX47Q9H0S4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.53■■□□□ 1.84
DDX47Q9H0S4 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
DDX47Q9H0S4 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC26.53■■□□□ 1.84
DDX47Q9H0S4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
DDX47Q9H0S4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
DDX47Q9H0S4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
DDX47Q9H0S4 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
DDX47Q9H0S4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.52■■□□□ 1.84
DDX47Q9H0S4 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
DDX47Q9H0S4 AL391121.1-201ENST00000607967 1349 ntBASIC26.52■■□□□ 1.84
DDX47Q9H0S4 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
DDX47Q9H0S4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
DDX47Q9H0S4 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.51■■□□□ 1.83
DDX47Q9H0S4 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
DDX47Q9H0S4 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.5■■□□□ 1.83
DDX47Q9H0S4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.5■■□□□ 1.83
DDX47Q9H0S4 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
DDX47Q9H0S4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.49■■□□□ 1.83
DDX47Q9H0S4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
DDX47Q9H0S4 AC135731.1-201ENST00000569415 2548 ntBASIC26.48■■□□□ 1.83
DDX47Q9H0S4 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
DDX47Q9H0S4 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
DDX47Q9H0S4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.48■■□□□ 1.83
DDX47Q9H0S4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
DDX47Q9H0S4 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
DDX47Q9H0S4 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
DDX47Q9H0S4 CAHM-201ENST00000604200 896 ntBASIC26.46■■□□□ 1.83
DDX47Q9H0S4 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
DDX47Q9H0S4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.46■■□□□ 1.83
DDX47Q9H0S4 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
DDX47Q9H0S4 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
DDX47Q9H0S4 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
DDX47Q9H0S4 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
DDX47Q9H0S4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.44■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms