Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
UPF3BQ9BZI7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC30.56■■■□□ 2.48
UPF3BQ9BZI7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC30.56■■■□□ 2.48
UPF3BQ9BZI7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC30.56■■■□□ 2.48
UPF3BQ9BZI7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
UPF3BQ9BZI7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.56■■■□□ 2.48
UPF3BQ9BZI7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.56■■■□□ 2.48
UPF3BQ9BZI7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC30.56■■■□□ 2.48
UPF3BQ9BZI7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
UPF3BQ9BZI7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
UPF3BQ9BZI7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
UPF3BQ9BZI7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC30.55■■■□□ 2.48
UPF3BQ9BZI7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
UPF3BQ9BZI7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
UPF3BQ9BZI7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC30.54■■■□□ 2.48
UPF3BQ9BZI7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.54■■■□□ 2.48
UPF3BQ9BZI7 MIR6090-201ENST00000622481 60 ntBASIC30.53■■■□□ 2.48
UPF3BQ9BZI7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
UPF3BQ9BZI7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.52■■■□□ 2.48
UPF3BQ9BZI7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
UPF3BQ9BZI7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
UPF3BQ9BZI7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.48
UPF3BQ9BZI7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
UPF3BQ9BZI7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
UPF3BQ9BZI7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
UPF3BQ9BZI7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
UPF3BQ9BZI7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
UPF3BQ9BZI7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
UPF3BQ9BZI7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.49■■■□□ 2.47
UPF3BQ9BZI7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
UPF3BQ9BZI7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
UPF3BQ9BZI7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC30.48■■■□□ 2.47
UPF3BQ9BZI7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
UPF3BQ9BZI7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
UPF3BQ9BZI7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.47■■■□□ 2.47
UPF3BQ9BZI7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
UPF3BQ9BZI7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.47
UPF3BQ9BZI7 AC108673.1-201ENST00000510422 1159 ntBASIC30.45■■■□□ 2.47
UPF3BQ9BZI7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.45■■■□□ 2.47
UPF3BQ9BZI7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC30.45■■■□□ 2.46
UPF3BQ9BZI7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
UPF3BQ9BZI7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
UPF3BQ9BZI7 MIR3665-201ENST00000578708 105 ntBASIC30.43■■■□□ 2.46
UPF3BQ9BZI7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
UPF3BQ9BZI7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC30.42■■■□□ 2.46
UPF3BQ9BZI7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.42■■■□□ 2.46
UPF3BQ9BZI7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
UPF3BQ9BZI7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
UPF3BQ9BZI7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC30.39■■■□□ 2.46
UPF3BQ9BZI7 AC135983.2-203ENST00000454486 1613 ntBASIC30.39■■■□□ 2.46
UPF3BQ9BZI7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC30.38■■■□□ 2.45
UPF3BQ9BZI7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC30.38■■■□□ 2.45
UPF3BQ9BZI7 AP006261.1-201ENST00000584783 668 ntBASIC30.38■■■□□ 2.45
UPF3BQ9BZI7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC30.38■■■□□ 2.45
UPF3BQ9BZI7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC30.38■■■□□ 2.45
UPF3BQ9BZI7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC30.38■■■□□ 2.45
UPF3BQ9BZI7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
UPF3BQ9BZI7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
UPF3BQ9BZI7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC30.37■■■□□ 2.45
UPF3BQ9BZI7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.37■■■□□ 2.45
UPF3BQ9BZI7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC30.37■■■□□ 2.45
UPF3BQ9BZI7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
UPF3BQ9BZI7 BX255925.1-201ENST00000566954 1854 ntBASIC30.37■■■□□ 2.45
UPF3BQ9BZI7 AL121749.1-202ENST00000609313 2153 ntBASIC30.37■■■□□ 2.45
UPF3BQ9BZI7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
UPF3BQ9BZI7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
UPF3BQ9BZI7 WHAMMP2-203ENST00000563942 1603 ntBASIC30.36■■■□□ 2.45
UPF3BQ9BZI7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
UPF3BQ9BZI7 AL162393.1-201ENST00000437852 946 ntBASIC30.36■■■□□ 2.45
UPF3BQ9BZI7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
UPF3BQ9BZI7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
UPF3BQ9BZI7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC30.35■■■□□ 2.45
UPF3BQ9BZI7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
UPF3BQ9BZI7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
UPF3BQ9BZI7 AC087741.3-201ENST00000624270 1347 ntBASIC30.34■■■□□ 2.45
UPF3BQ9BZI7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
UPF3BQ9BZI7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
UPF3BQ9BZI7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.33■■■□□ 2.45
UPF3BQ9BZI7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.33■■■□□ 2.45
UPF3BQ9BZI7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
UPF3BQ9BZI7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
UPF3BQ9BZI7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
UPF3BQ9BZI7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC30.31■■■□□ 2.44
UPF3BQ9BZI7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
UPF3BQ9BZI7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC30.31■■■□□ 2.44
UPF3BQ9BZI7 LINC01003-201ENST00000564834 1764 ntBASIC30.31■■■□□ 2.44
UPF3BQ9BZI7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC30.3■■■□□ 2.44
UPF3BQ9BZI7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
UPF3BQ9BZI7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
UPF3BQ9BZI7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
UPF3BQ9BZI7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
UPF3BQ9BZI7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
UPF3BQ9BZI7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
UPF3BQ9BZI7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC30.29■■■□□ 2.44
UPF3BQ9BZI7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
UPF3BQ9BZI7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
UPF3BQ9BZI7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
UPF3BQ9BZI7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
UPF3BQ9BZI7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
UPF3BQ9BZI7 LINC00273-201ENST00000539813 1452 ntBASIC30.26■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms