Protein–RNA interactions for Protein: Q9BVG4

PBDC1, Protein PBDC1, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PBDC1Q9BVG4 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PBDC1Q9BVG4 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
PBDC1Q9BVG4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PBDC1Q9BVG4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PBDC1Q9BVG4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.69■□□□□ 0.9
PBDC1Q9BVG4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PBDC1Q9BVG4 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PBDC1Q9BVG4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PBDC1Q9BVG4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PBDC1Q9BVG4 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PBDC1Q9BVG4 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PBDC1Q9BVG4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PBDC1Q9BVG4 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PBDC1Q9BVG4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PBDC1Q9BVG4 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.66■□□□□ 0.9
PBDC1Q9BVG4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PBDC1Q9BVG4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PBDC1Q9BVG4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PBDC1Q9BVG4 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PBDC1Q9BVG4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PBDC1Q9BVG4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PBDC1Q9BVG4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PBDC1Q9BVG4 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PBDC1Q9BVG4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PBDC1Q9BVG4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PBDC1Q9BVG4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.63■□□□□ 0.89
PBDC1Q9BVG4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.63■□□□□ 0.89
PBDC1Q9BVG4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PBDC1Q9BVG4 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PBDC1Q9BVG4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.62■□□□□ 0.89
PBDC1Q9BVG4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PBDC1Q9BVG4 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PBDC1Q9BVG4 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PBDC1Q9BVG4 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.62■□□□□ 0.89
PBDC1Q9BVG4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.61■□□□□ 0.89
PBDC1Q9BVG4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PBDC1Q9BVG4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PBDC1Q9BVG4 BX255925.1-201ENST00000566954 1854 ntBASIC20.61■□□□□ 0.89
PBDC1Q9BVG4 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.61■□□□□ 0.89
PBDC1Q9BVG4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PBDC1Q9BVG4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PBDC1Q9BVG4 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
PBDC1Q9BVG4 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PBDC1Q9BVG4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
PBDC1Q9BVG4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PBDC1Q9BVG4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PBDC1Q9BVG4 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PBDC1Q9BVG4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PBDC1Q9BVG4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PBDC1Q9BVG4 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PBDC1Q9BVG4 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC20.59■□□□□ 0.89
PBDC1Q9BVG4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PBDC1Q9BVG4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.58■□□□□ 0.89
PBDC1Q9BVG4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PBDC1Q9BVG4 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PBDC1Q9BVG4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
PBDC1Q9BVG4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
PBDC1Q9BVG4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PBDC1Q9BVG4 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PBDC1Q9BVG4 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PBDC1Q9BVG4 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PBDC1Q9BVG4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
PBDC1Q9BVG4 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
PBDC1Q9BVG4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PBDC1Q9BVG4 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PBDC1Q9BVG4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.55■□□□□ 0.88
PBDC1Q9BVG4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PBDC1Q9BVG4 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.55■□□□□ 0.88
PBDC1Q9BVG4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PBDC1Q9BVG4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PBDC1Q9BVG4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PBDC1Q9BVG4 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.54■□□□□ 0.88
PBDC1Q9BVG4 WASH5P-204ENST00000632292 975 ntBASIC20.54■□□□□ 0.88
PBDC1Q9BVG4 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PBDC1Q9BVG4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.54■□□□□ 0.88
PBDC1Q9BVG4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.54■□□□□ 0.88
PBDC1Q9BVG4 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.53■□□□□ 0.88
PBDC1Q9BVG4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PBDC1Q9BVG4 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PBDC1Q9BVG4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PBDC1Q9BVG4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PBDC1Q9BVG4 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.52■□□□□ 0.88
PBDC1Q9BVG4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.52■□□□□ 0.88
PBDC1Q9BVG4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PBDC1Q9BVG4 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PBDC1Q9BVG4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
PBDC1Q9BVG4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
PBDC1Q9BVG4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.51■□□□□ 0.87
PBDC1Q9BVG4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PBDC1Q9BVG4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PBDC1Q9BVG4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.5■□□□□ 0.87
PBDC1Q9BVG4 AL133380.1-201ENST00000506013 324 ntBASIC20.5■□□□□ 0.87
PBDC1Q9BVG4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
PBDC1Q9BVG4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PBDC1Q9BVG4 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PBDC1Q9BVG4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
PBDC1Q9BVG4 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.49■□□□□ 0.87
PBDC1Q9BVG4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PBDC1Q9BVG4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.48■□□□□ 0.87
PBDC1Q9BVG4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms