Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
COL21A1Q96P44 BOD1-206ENST00000480951 814 ntTSL 2 BASIC24.1■■□□□ 1.45
COL21A1Q96P44 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
COL21A1Q96P44 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
COL21A1Q96P44 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
COL21A1Q96P44 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
COL21A1Q96P44 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC24.08■■□□□ 1.45
COL21A1Q96P44 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
COL21A1Q96P44 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.07■■□□□ 1.44
COL21A1Q96P44 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
COL21A1Q96P44 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
COL21A1Q96P44 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.06■■□□□ 1.44
COL21A1Q96P44 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.06■■□□□ 1.44
COL21A1Q96P44 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.06■■□□□ 1.44
COL21A1Q96P44 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
COL21A1Q96P44 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
COL21A1Q96P44 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
COL21A1Q96P44 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
COL21A1Q96P44 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.05■■□□□ 1.44
COL21A1Q96P44 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
COL21A1Q96P44 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
COL21A1Q96P44 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
COL21A1Q96P44 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.04■■□□□ 1.44
COL21A1Q96P44 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24.04■■□□□ 1.44
COL21A1Q96P44 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
COL21A1Q96P44 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
COL21A1Q96P44 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
COL21A1Q96P44 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
COL21A1Q96P44 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL21A1Q96P44 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
COL21A1Q96P44 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL21A1Q96P44 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC24.01■■□□□ 1.43
COL21A1Q96P44 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.01■■□□□ 1.43
COL21A1Q96P44 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COL21A1Q96P44 AC127502.1-201ENST00000399971 1502 ntBASIC24■■□□□ 1.43
COL21A1Q96P44 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
COL21A1Q96P44 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
COL21A1Q96P44 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL21A1Q96P44 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL21A1Q96P44 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
COL21A1Q96P44 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
COL21A1Q96P44 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
COL21A1Q96P44 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL21A1Q96P44 AP004833.2-201ENST00000532228 1454 ntBASIC23.97■■□□□ 1.43
COL21A1Q96P44 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.96■■□□□ 1.43
COL21A1Q96P44 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL21A1Q96P44 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.96■■□□□ 1.43
COL21A1Q96P44 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.96■■□□□ 1.43
COL21A1Q96P44 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
COL21A1Q96P44 DUX4L29-201ENST00000425409 679 ntBASIC23.94■■□□□ 1.42
COL21A1Q96P44 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
COL21A1Q96P44 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.94■■□□□ 1.42
COL21A1Q96P44 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
COL21A1Q96P44 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
COL21A1Q96P44 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.93■■□□□ 1.42
COL21A1Q96P44 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL21A1Q96P44 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL21A1Q96P44 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL21A1Q96P44 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
COL21A1Q96P44 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
COL21A1Q96P44 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.91■■□□□ 1.42
COL21A1Q96P44 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL21A1Q96P44 AC021231.2-201ENST00000594613 730 ntBASIC23.91■■□□□ 1.42
COL21A1Q96P44 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.91■■□□□ 1.42
COL21A1Q96P44 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.9■■□□□ 1.42
COL21A1Q96P44 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL21A1Q96P44 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL21A1Q96P44 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.9■■□□□ 1.42
COL21A1Q96P44 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.9■■□□□ 1.42
COL21A1Q96P44 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.9■■□□□ 1.42
COL21A1Q96P44 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL21A1Q96P44 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
COL21A1Q96P44 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
COL21A1Q96P44 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
COL21A1Q96P44 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.89■■□□□ 1.41
COL21A1Q96P44 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
COL21A1Q96P44 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.88■■□□□ 1.41
COL21A1Q96P44 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
COL21A1Q96P44 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL21A1Q96P44 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL21A1Q96P44 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL21A1Q96P44 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL21A1Q96P44 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.87■■□□□ 1.41
COL21A1Q96P44 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.87■■□□□ 1.41
COL21A1Q96P44 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.87■■□□□ 1.41
COL21A1Q96P44 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
COL21A1Q96P44 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
COL21A1Q96P44 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
COL21A1Q96P44 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL21A1Q96P44 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL21A1Q96P44 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
COL21A1Q96P44 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.86■■□□□ 1.41
COL21A1Q96P44 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL21A1Q96P44 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.86■■□□□ 1.41
COL21A1Q96P44 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL21A1Q96P44 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
COL21A1Q96P44 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
COL21A1Q96P44 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL21A1Q96P44 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL21A1Q96P44 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms