Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SNRNP40Q96DI7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SNRNP40Q96DI7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
SNRNP40Q96DI7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SNRNP40Q96DI7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SNRNP40Q96DI7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
SNRNP40Q96DI7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.39■■□□□ 1.33
SNRNP40Q96DI7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.38■■□□□ 1.33
SNRNP40Q96DI7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
SNRNP40Q96DI7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SNRNP40Q96DI7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
SNRNP40Q96DI7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
SNRNP40Q96DI7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.37■■□□□ 1.33
SNRNP40Q96DI7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.37■■□□□ 1.33
SNRNP40Q96DI7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SNRNP40Q96DI7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SNRNP40Q96DI7 AC127502.1-201ENST00000399971 1502 ntBASIC23.36■■□□□ 1.33
SNRNP40Q96DI7 AC135983.2-203ENST00000454486 1613 ntBASIC23.36■■□□□ 1.33
SNRNP40Q96DI7 WHAMMP2-203ENST00000563942 1603 ntBASIC23.36■■□□□ 1.33
SNRNP40Q96DI7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.35■■□□□ 1.33
SNRNP40Q96DI7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SNRNP40Q96DI7 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC23.34■■□□□ 1.33
SNRNP40Q96DI7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SNRNP40Q96DI7 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SNRNP40Q96DI7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SNRNP40Q96DI7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SNRNP40Q96DI7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
SNRNP40Q96DI7 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
SNRNP40Q96DI7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SNRNP40Q96DI7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.33■■□□□ 1.33
SNRNP40Q96DI7 AL033527.3-201ENST00000566366 1196 ntBASIC23.33■■□□□ 1.33
SNRNP40Q96DI7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SNRNP40Q96DI7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.32
SNRNP40Q96DI7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
SNRNP40Q96DI7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.32■■□□□ 1.32
SNRNP40Q96DI7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
SNRNP40Q96DI7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
SNRNP40Q96DI7 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
SNRNP40Q96DI7 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SNRNP40Q96DI7 U85056.1-201ENST00000616429 682 ntBASIC23.31■■□□□ 1.32
SNRNP40Q96DI7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SNRNP40Q96DI7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SNRNP40Q96DI7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.3■■□□□ 1.32
SNRNP40Q96DI7 AC110285.7-201ENST00000624417 1536 ntBASIC23.29■■□□□ 1.32
SNRNP40Q96DI7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SNRNP40Q96DI7 AC060814.1-201ENST00000554326 538 ntBASIC23.29■■□□□ 1.32
SNRNP40Q96DI7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.29■■□□□ 1.32
SNRNP40Q96DI7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SNRNP40Q96DI7 AC018358.1-201ENST00000631079 1402 ntBASIC23.28■■□□□ 1.32
SNRNP40Q96DI7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SNRNP40Q96DI7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SNRNP40Q96DI7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SNRNP40Q96DI7 AC148477.6-201ENST00000623746 465 ntBASIC23.27■■□□□ 1.32
SNRNP40Q96DI7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SNRNP40Q96DI7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.27■■□□□ 1.32
SNRNP40Q96DI7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.26■■□□□ 1.31
SNRNP40Q96DI7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
SNRNP40Q96DI7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SNRNP40Q96DI7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SNRNP40Q96DI7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
SNRNP40Q96DI7 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SNRNP40Q96DI7 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SNRNP40Q96DI7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.23■■□□□ 1.31
SNRNP40Q96DI7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SNRNP40Q96DI7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
SNRNP40Q96DI7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.23■■□□□ 1.31
SNRNP40Q96DI7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
SNRNP40Q96DI7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.21■■□□□ 1.31
SNRNP40Q96DI7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.21■■□□□ 1.31
SNRNP40Q96DI7 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.21■■□□□ 1.31
SNRNP40Q96DI7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
SNRNP40Q96DI7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.2■■□□□ 1.3
SNRNP40Q96DI7 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
SNRNP40Q96DI7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.19■■□□□ 1.3
SNRNP40Q96DI7 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SNRNP40Q96DI7 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SNRNP40Q96DI7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
SNRNP40Q96DI7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
SNRNP40Q96DI7 MIR219A2-201ENST00000608502 1504 ntBASIC23.18■■□□□ 1.3
SNRNP40Q96DI7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SNRNP40Q96DI7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SNRNP40Q96DI7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SNRNP40Q96DI7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SNRNP40Q96DI7 TSPY13P-201ENST00000338964 914 ntBASIC23.17■■□□□ 1.3
SNRNP40Q96DI7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.17■■□□□ 1.3
SNRNP40Q96DI7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SNRNP40Q96DI7 KRT18P60-201ENST00000312876 1297 ntBASIC23.16■■□□□ 1.3
SNRNP40Q96DI7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SNRNP40Q96DI7 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.16■■□□□ 1.3
SNRNP40Q96DI7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.16■■□□□ 1.3
SNRNP40Q96DI7 AC092296.2-201ENST00000589470 999 ntBASIC23.16■■□□□ 1.3
SNRNP40Q96DI7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SNRNP40Q96DI7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SNRNP40Q96DI7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SNRNP40Q96DI7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.15■■□□□ 1.3
SNRNP40Q96DI7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.15■■□□□ 1.3
SNRNP40Q96DI7 AC004987.1-201ENST00000428627 508 ntBASIC23.15■■□□□ 1.3
SNRNP40Q96DI7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SNRNP40Q96DI7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SNRNP40Q96DI7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 494.7 ms