Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 DUX4L10-201ENST00000622460 1267 ntBASIC25.9■■□□□ 1.74
ECHDC3Q96DC8 DUX4L25-201ENST00000624915 1269 ntBASIC25.9■■□□□ 1.74
ECHDC3Q96DC8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
ECHDC3Q96DC8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
ECHDC3Q96DC8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.89■■□□□ 1.74
ECHDC3Q96DC8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
ECHDC3Q96DC8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.88■■□□□ 1.73
ECHDC3Q96DC8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
ECHDC3Q96DC8 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.88■■□□□ 1.73
ECHDC3Q96DC8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.88■■□□□ 1.73
ECHDC3Q96DC8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
ECHDC3Q96DC8 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
ECHDC3Q96DC8 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
ECHDC3Q96DC8 CR559946.2-201ENST00000623684 991 ntBASIC25.87■■□□□ 1.73
ECHDC3Q96DC8 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
ECHDC3Q96DC8 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
ECHDC3Q96DC8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
ECHDC3Q96DC8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
ECHDC3Q96DC8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
ECHDC3Q96DC8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
ECHDC3Q96DC8 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
ECHDC3Q96DC8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.86■■□□□ 1.73
ECHDC3Q96DC8 MIR3648-2-201ENST00000581792 180 ntBASIC25.86■■□□□ 1.73
ECHDC3Q96DC8 MIR3648-1-201ENST00000615959 180 ntBASIC25.86■■□□□ 1.73
ECHDC3Q96DC8 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
ECHDC3Q96DC8 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ECHDC3Q96DC8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ECHDC3Q96DC8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.84■■□□□ 1.73
ECHDC3Q96DC8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.84■■□□□ 1.73
ECHDC3Q96DC8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.84■■□□□ 1.73
ECHDC3Q96DC8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.83■■□□□ 1.73
ECHDC3Q96DC8 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.83■■□□□ 1.73
ECHDC3Q96DC8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.73
ECHDC3Q96DC8 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ECHDC3Q96DC8 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.83■■□□□ 1.73
ECHDC3Q96DC8 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.82■■□□□ 1.72
ECHDC3Q96DC8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.82■■□□□ 1.72
ECHDC3Q96DC8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
ECHDC3Q96DC8 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ECHDC3Q96DC8 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ECHDC3Q96DC8 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.81■■□□□ 1.72
ECHDC3Q96DC8 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ECHDC3Q96DC8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.8■■□□□ 1.72
ECHDC3Q96DC8 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.8■■□□□ 1.72
ECHDC3Q96DC8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ECHDC3Q96DC8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.79■■□□□ 1.72
ECHDC3Q96DC8 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
ECHDC3Q96DC8 AC016575.1-201ENST00000607026 382 ntBASIC25.79■■□□□ 1.72
ECHDC3Q96DC8 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.79■■□□□ 1.72
ECHDC3Q96DC8 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
ECHDC3Q96DC8 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
ECHDC3Q96DC8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
ECHDC3Q96DC8 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
ECHDC3Q96DC8 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.76■■□□□ 1.71
ECHDC3Q96DC8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.76■■□□□ 1.71
ECHDC3Q96DC8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.76■■□□□ 1.71
ECHDC3Q96DC8 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
ECHDC3Q96DC8 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
ECHDC3Q96DC8 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
ECHDC3Q96DC8 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.75■■□□□ 1.71
ECHDC3Q96DC8 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.75■■□□□ 1.71
ECHDC3Q96DC8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
ECHDC3Q96DC8 ABCB10P3-201ENST00000561950 2166 ntBASIC25.74■■□□□ 1.71
ECHDC3Q96DC8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
ECHDC3Q96DC8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.74■■□□□ 1.71
ECHDC3Q96DC8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.74■■□□□ 1.71
ECHDC3Q96DC8 AC100797.4-201ENST00000631653 1827 ntBASIC25.74■■□□□ 1.71
ECHDC3Q96DC8 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.74■■□□□ 1.71
ECHDC3Q96DC8 MIR639-201ENST00000384974 98 ntBASIC25.73■■□□□ 1.71
ECHDC3Q96DC8 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.73■■□□□ 1.71
ECHDC3Q96DC8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC25.73■■□□□ 1.71
ECHDC3Q96DC8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.73■■□□□ 1.71
ECHDC3Q96DC8 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
ECHDC3Q96DC8 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
ECHDC3Q96DC8 HLA-V-202ENST00000446817 847 ntBASIC25.72■■□□□ 1.71
ECHDC3Q96DC8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
ECHDC3Q96DC8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.72■■□□□ 1.71
ECHDC3Q96DC8 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
ECHDC3Q96DC8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
ECHDC3Q96DC8 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
ECHDC3Q96DC8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
ECHDC3Q96DC8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
ECHDC3Q96DC8 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
ECHDC3Q96DC8 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.7■■□□□ 1.7
ECHDC3Q96DC8 AC110285.7-201ENST00000624417 1536 ntBASIC25.69■■□□□ 1.7
ECHDC3Q96DC8 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
ECHDC3Q96DC8 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ECHDC3Q96DC8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ECHDC3Q96DC8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ECHDC3Q96DC8 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.68■■□□□ 1.7
ECHDC3Q96DC8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
ECHDC3Q96DC8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
ECHDC3Q96DC8 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.67■■□□□ 1.7
ECHDC3Q96DC8 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.66■■□□□ 1.7
ECHDC3Q96DC8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ECHDC3Q96DC8 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
ECHDC3Q96DC8 AC139426.1-201ENST00000568218 2529 ntBASIC25.65■■□□□ 1.7
ECHDC3Q96DC8 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ECHDC3Q96DC8 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.65■■□□□ 1.7
ECHDC3Q96DC8 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.64■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms