Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 AC135983.2-203ENST00000454486 1613 ntBASIC32.19■■■□□ 2.74
RPGRQ92834 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC32.19■■■□□ 2.74
RPGRQ92834 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
RPGRQ92834 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC32.18■■■□□ 2.74
RPGRQ92834 HES4-202ENST00000428771 1040 ntTSL 2 BASIC32.17■■■□□ 2.74
RPGRQ92834 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
RPGRQ92834 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC32.16■■■□□ 2.74
RPGRQ92834 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
RPGRQ92834 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC32.16■■■□□ 2.74
RPGRQ92834 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC32.15■■■□□ 2.74
RPGRQ92834 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC32.15■■■□□ 2.74
RPGRQ92834 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
RPGRQ92834 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC32.15■■■□□ 2.74
RPGRQ92834 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC32.15■■■□□ 2.74
RPGRQ92834 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC32.15■■■□□ 2.74
RPGRQ92834 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
RPGRQ92834 NTF6A-201ENST00000591175 560 ntBASIC32.14■■■□□ 2.74
RPGRQ92834 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC32.13■■■□□ 2.73
RPGRQ92834 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC32.13■■■□□ 2.73
RPGRQ92834 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC32.13■■■□□ 2.73
RPGRQ92834 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC32.12■■■□□ 2.73
RPGRQ92834 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
RPGRQ92834 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
RPGRQ92834 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC32.1■■■□□ 2.73
RPGRQ92834 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC32.1■■■□□ 2.73
RPGRQ92834 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
RPGRQ92834 CHST11-203ENST00000547956 936 ntTSL 2 BASIC32.1■■■□□ 2.73
RPGRQ92834 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC32.09■■■□□ 2.73
RPGRQ92834 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
RPGRQ92834 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC32.08■■■□□ 2.73
RPGRQ92834 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC32.07■■■□□ 2.72
RPGRQ92834 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC32.07■■■□□ 2.72
RPGRQ92834 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
RPGRQ92834 AC110285.7-201ENST00000624417 1536 ntBASIC32.06■■■□□ 2.72
RPGRQ92834 AC012354.3-201ENST00000623734 483 ntBASIC32.06■■■□□ 2.72
RPGRQ92834 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
RPGRQ92834 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC32.03■■■□□ 2.72
RPGRQ92834 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
RPGRQ92834 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC32.03■■■□□ 2.72
RPGRQ92834 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
RPGRQ92834 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
RPGRQ92834 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC32.01■■■□□ 2.72
RPGRQ92834 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
RPGRQ92834 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
RPGRQ92834 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
RPGRQ92834 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC32■■■□□ 2.71
RPGRQ92834 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.99■■■□□ 2.71
RPGRQ92834 AC148477.6-201ENST00000623746 465 ntBASIC31.99■■■□□ 2.71
RPGRQ92834 AL135925.1-201ENST00000605920 1701 ntBASIC31.99■■■□□ 2.71
RPGRQ92834 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
RPGRQ92834 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC31.99■■■□□ 2.71
RPGRQ92834 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
RPGRQ92834 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
RPGRQ92834 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.98■■■□□ 2.71
RPGRQ92834 AC060814.1-201ENST00000554326 538 ntBASIC31.96■■■□□ 2.71
RPGRQ92834 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC31.95■■■□□ 2.71
RPGRQ92834 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC31.95■■■□□ 2.7
RPGRQ92834 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
RPGRQ92834 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.94■■■□□ 2.7
RPGRQ92834 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC31.94■■■□□ 2.7
RPGRQ92834 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
RPGRQ92834 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
RPGRQ92834 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
RPGRQ92834 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
RPGRQ92834 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
RPGRQ92834 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC31.91■■■□□ 2.7
RPGRQ92834 RPS2-210ENST00000530225 765 ntTSL 2 BASIC31.91■■■□□ 2.7
RPGRQ92834 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC31.91■■■□□ 2.7
RPGRQ92834 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC31.91■■■□□ 2.7
RPGRQ92834 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
RPGRQ92834 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC31.89■■■□□ 2.7
RPGRQ92834 HYI-213ENST00000583037 1322 ntTSL 5 BASIC31.89■■■□□ 2.7
RPGRQ92834 U85056.1-201ENST00000616429 682 ntBASIC31.88■■■□□ 2.69
RPGRQ92834 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC31.88■■■□□ 2.69
RPGRQ92834 MIR219A2-201ENST00000608502 1504 ntBASIC31.88■■■□□ 2.69
RPGRQ92834 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
RPGRQ92834 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
RPGRQ92834 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
RPGRQ92834 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
RPGRQ92834 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
RPGRQ92834 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
RPGRQ92834 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
RPGRQ92834 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
RPGRQ92834 AL033527.3-201ENST00000566366 1196 ntBASIC31.86■■■□□ 2.69
RPGRQ92834 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
RPGRQ92834 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC31.85■■■□□ 2.69
RPGRQ92834 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
RPGRQ92834 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC31.84■■■□□ 2.69
RPGRQ92834 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
RPGRQ92834 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.83■■■□□ 2.69
RPGRQ92834 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
RPGRQ92834 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC31.83■■■□□ 2.69
RPGRQ92834 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC31.83■■■□□ 2.69
RPGRQ92834 AC018358.1-201ENST00000631079 1402 ntBASIC31.83■■■□□ 2.69
RPGRQ92834 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.69
RPGRQ92834 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
RPGRQ92834 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
RPGRQ92834 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
RPGRQ92834 PEX7-203ENST00000541292 945 ntTSL 5 BASIC31.82■■■□□ 2.68
RPGRQ92834 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms