Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
RTL9Q8NET4 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
RTL9Q8NET4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC32.02■■■□□ 2.72
RTL9Q8NET4 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC32.01■■■□□ 2.71
RTL9Q8NET4 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
RTL9Q8NET4 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
RTL9Q8NET4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC32■■■□□ 2.71
RTL9Q8NET4 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
RTL9Q8NET4 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.99■■■□□ 2.71
RTL9Q8NET4 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
RTL9Q8NET4 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
RTL9Q8NET4 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
RTL9Q8NET4 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31.98■■■□□ 2.71
RTL9Q8NET4 AC008813.1-201ENST00000536597 885 ntBASIC31.98■■■□□ 2.71
RTL9Q8NET4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC31.98■■■□□ 2.71
RTL9Q8NET4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
RTL9Q8NET4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
RTL9Q8NET4 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.98■■■□□ 2.71
RTL9Q8NET4 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC31.98■■■□□ 2.71
RTL9Q8NET4 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
RTL9Q8NET4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
RTL9Q8NET4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
RTL9Q8NET4 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
RTL9Q8NET4 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.95■■■□□ 2.71
RTL9Q8NET4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.71
RTL9Q8NET4 RARRES2P2-201ENST00000394842 485 ntBASIC31.94■■■□□ 2.7
RTL9Q8NET4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC31.94■■■□□ 2.7
RTL9Q8NET4 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
RTL9Q8NET4 ST7-AS1-201ENST00000456775 1889 ntBASIC31.94■■■□□ 2.7
RTL9Q8NET4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
RTL9Q8NET4 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC31.93■■■□□ 2.7
RTL9Q8NET4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
RTL9Q8NET4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC31.93■■■□□ 2.7
RTL9Q8NET4 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.92■■■□□ 2.7
RTL9Q8NET4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
RTL9Q8NET4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
RTL9Q8NET4 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC31.91■■■□□ 2.7
RTL9Q8NET4 AC110285.7-201ENST00000624417 1536 ntBASIC31.9■■■□□ 2.7
RTL9Q8NET4 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC31.9■■■□□ 2.7
RTL9Q8NET4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
RTL9Q8NET4 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC31.9■■■□□ 2.7
RTL9Q8NET4 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
RTL9Q8NET4 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
RTL9Q8NET4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC31.89■■■□□ 2.7
RTL9Q8NET4 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
RTL9Q8NET4 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
RTL9Q8NET4 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
RTL9Q8NET4 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
RTL9Q8NET4 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
RTL9Q8NET4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
RTL9Q8NET4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC31.87■■■□□ 2.69
RTL9Q8NET4 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
RTL9Q8NET4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
RTL9Q8NET4 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC31.86■■■□□ 2.69
RTL9Q8NET4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC31.86■■■□□ 2.69
RTL9Q8NET4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC31.86■■■□□ 2.69
RTL9Q8NET4 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
RTL9Q8NET4 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
RTL9Q8NET4 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC31.86■■■□□ 2.69
RTL9Q8NET4 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC31.85■■■□□ 2.69
RTL9Q8NET4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC31.85■■■□□ 2.69
RTL9Q8NET4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC31.85■■■□□ 2.69
RTL9Q8NET4 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
RTL9Q8NET4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC31.84■■■□□ 2.69
RTL9Q8NET4 AC148477.6-201ENST00000623746 465 ntBASIC31.84■■■□□ 2.69
RTL9Q8NET4 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
RTL9Q8NET4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
RTL9Q8NET4 GPX1-201ENST00000419349 1106 ntBASIC31.83■■■□□ 2.69
RTL9Q8NET4 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
RTL9Q8NET4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
RTL9Q8NET4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC31.82■■■□□ 2.69
RTL9Q8NET4 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC31.82■■■□□ 2.69
RTL9Q8NET4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC31.82■■■□□ 2.69
RTL9Q8NET4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC31.82■■■□□ 2.68
RTL9Q8NET4 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
RTL9Q8NET4 ABHD17AP5-201ENST00000580133 923 ntBASIC31.81■■■□□ 2.68
RTL9Q8NET4 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
RTL9Q8NET4 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
RTL9Q8NET4 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.81■■■□□ 2.68
RTL9Q8NET4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC31.81■■■□□ 2.68
RTL9Q8NET4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
RTL9Q8NET4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
RTL9Q8NET4 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
RTL9Q8NET4 AP004833.2-201ENST00000532228 1454 ntBASIC31.8■■■□□ 2.68
RTL9Q8NET4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
RTL9Q8NET4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
RTL9Q8NET4 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.78■■■□□ 2.68
RTL9Q8NET4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
RTL9Q8NET4 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
RTL9Q8NET4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
RTL9Q8NET4 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
RTL9Q8NET4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
RTL9Q8NET4 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
RTL9Q8NET4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC31.76■■■□□ 2.68
RTL9Q8NET4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
RTL9Q8NET4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.67
RTL9Q8NET4 RNF126P1-201ENST00000567452 1320 ntBASIC31.76■■■□□ 2.67
RTL9Q8NET4 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.75■■■□□ 2.67
RTL9Q8NET4 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
RTL9Q8NET4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms