Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
SHCBP1Q8NEM2 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
SHCBP1Q8NEM2 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC29.61■■■□□ 2.33
SHCBP1Q8NEM2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC29.61■■■□□ 2.33
SHCBP1Q8NEM2 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC29.61■■■□□ 2.33
SHCBP1Q8NEM2 AC022413.1-201ENST00000624602 984 ntBASIC29.61■■■□□ 2.33
SHCBP1Q8NEM2 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
SHCBP1Q8NEM2 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC29.6■■■□□ 2.33
SHCBP1Q8NEM2 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
SHCBP1Q8NEM2 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC29.6■■■□□ 2.33
SHCBP1Q8NEM2 AL135925.1-201ENST00000605920 1701 ntBASIC29.59■■■□□ 2.33
SHCBP1Q8NEM2 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC29.59■■■□□ 2.33
SHCBP1Q8NEM2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
SHCBP1Q8NEM2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
SHCBP1Q8NEM2 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC29.58■■■□□ 2.33
SHCBP1Q8NEM2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
SHCBP1Q8NEM2 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
SHCBP1Q8NEM2 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
SHCBP1Q8NEM2 HES4-202ENST00000428771 1040 ntTSL 2 BASIC29.58■■■□□ 2.33
SHCBP1Q8NEM2 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC29.56■■■□□ 2.32
SHCBP1Q8NEM2 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
SHCBP1Q8NEM2 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
SHCBP1Q8NEM2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC29.56■■■□□ 2.32
SHCBP1Q8NEM2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC29.56■■■□□ 2.32
SHCBP1Q8NEM2 CHST11-203ENST00000547956 936 ntTSL 2 BASIC29.55■■■□□ 2.32
SHCBP1Q8NEM2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC29.55■■■□□ 2.32
SHCBP1Q8NEM2 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
SHCBP1Q8NEM2 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
SHCBP1Q8NEM2 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC29.54■■■□□ 2.32
SHCBP1Q8NEM2 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC29.54■■■□□ 2.32
SHCBP1Q8NEM2 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
SHCBP1Q8NEM2 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC29.54■■■□□ 2.32
SHCBP1Q8NEM2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC29.53■■■□□ 2.32
SHCBP1Q8NEM2 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
SHCBP1Q8NEM2 AC110285.7-201ENST00000624417 1536 ntBASIC29.53■■■□□ 2.32
SHCBP1Q8NEM2 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC29.53■■■□□ 2.32
SHCBP1Q8NEM2 AC148477.6-201ENST00000623746 465 ntBASIC29.52■■■□□ 2.32
SHCBP1Q8NEM2 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC29.51■■■□□ 2.31
SHCBP1Q8NEM2 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC29.51■■■□□ 2.31
SHCBP1Q8NEM2 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC29.51■■■□□ 2.31
SHCBP1Q8NEM2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC29.5■■■□□ 2.31
SHCBP1Q8NEM2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
SHCBP1Q8NEM2 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC29.49■■■□□ 2.31
SHCBP1Q8NEM2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
SHCBP1Q8NEM2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
SHCBP1Q8NEM2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC29.46■■■□□ 2.31
SHCBP1Q8NEM2 NTF6A-201ENST00000591175 560 ntBASIC29.46■■■□□ 2.31
SHCBP1Q8NEM2 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
SHCBP1Q8NEM2 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC29.43■■■□□ 2.3
SHCBP1Q8NEM2 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SHCBP1Q8NEM2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC29.42■■■□□ 2.3
SHCBP1Q8NEM2 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
SHCBP1Q8NEM2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC29.42■■■□□ 2.3
SHCBP1Q8NEM2 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC29.41■■■□□ 2.3
SHCBP1Q8NEM2 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SHCBP1Q8NEM2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
SHCBP1Q8NEM2 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
SHCBP1Q8NEM2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC29.4■■■□□ 2.3
SHCBP1Q8NEM2 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC29.4■■■□□ 2.3
SHCBP1Q8NEM2 PEX7-203ENST00000541292 945 ntTSL 5 BASIC29.4■■■□□ 2.3
SHCBP1Q8NEM2 AC060814.1-201ENST00000554326 538 ntBASIC29.4■■■□□ 2.3
SHCBP1Q8NEM2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SHCBP1Q8NEM2 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SHCBP1Q8NEM2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SHCBP1Q8NEM2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC29.38■■■□□ 2.29
SHCBP1Q8NEM2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC29.38■■■□□ 2.29
SHCBP1Q8NEM2 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC29.38■■■□□ 2.29
SHCBP1Q8NEM2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC29.38■■■□□ 2.29
SHCBP1Q8NEM2 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
SHCBP1Q8NEM2 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SHCBP1Q8NEM2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
SHCBP1Q8NEM2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
SHCBP1Q8NEM2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC29.37■■■□□ 2.29
SHCBP1Q8NEM2 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
SHCBP1Q8NEM2 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
SHCBP1Q8NEM2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
SHCBP1Q8NEM2 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC29.37■■■□□ 2.29
SHCBP1Q8NEM2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC29.36■■■□□ 2.29
SHCBP1Q8NEM2 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
SHCBP1Q8NEM2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC29.36■■■□□ 2.29
SHCBP1Q8NEM2 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SHCBP1Q8NEM2 AC012354.3-201ENST00000623734 483 ntBASIC29.35■■■□□ 2.29
SHCBP1Q8NEM2 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC29.35■■■□□ 2.29
SHCBP1Q8NEM2 MIR219A2-201ENST00000608502 1504 ntBASIC29.35■■■□□ 2.29
SHCBP1Q8NEM2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
SHCBP1Q8NEM2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
SHCBP1Q8NEM2 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SHCBP1Q8NEM2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SHCBP1Q8NEM2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
SHCBP1Q8NEM2 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
SHCBP1Q8NEM2 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
SHCBP1Q8NEM2 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SHCBP1Q8NEM2 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SHCBP1Q8NEM2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SHCBP1Q8NEM2 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SHCBP1Q8NEM2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC29.3■■■□□ 2.28
SHCBP1Q8NEM2 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
SHCBP1Q8NEM2 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC29.29■■■□□ 2.28
SHCBP1Q8NEM2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC29.29■■■□□ 2.28
SHCBP1Q8NEM2 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms