Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC28.9■■■□□ 2.22
SLC17A8Q8NDX2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
SLC17A8Q8NDX2 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC28.89■■■□□ 2.22
SLC17A8Q8NDX2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC28.88■■■□□ 2.21
SLC17A8Q8NDX2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC28.88■■■□□ 2.21
SLC17A8Q8NDX2 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
SLC17A8Q8NDX2 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC28.87■■■□□ 2.21
SLC17A8Q8NDX2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
SLC17A8Q8NDX2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
SLC17A8Q8NDX2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
SLC17A8Q8NDX2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.86■■■□□ 2.21
SLC17A8Q8NDX2 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
SLC17A8Q8NDX2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC28.85■■■□□ 2.21
SLC17A8Q8NDX2 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
SLC17A8Q8NDX2 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
SLC17A8Q8NDX2 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC28.84■■■□□ 2.21
SLC17A8Q8NDX2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC28.84■■■□□ 2.21
SLC17A8Q8NDX2 RARRES2P1-201ENST00000474487 481 ntBASIC28.84■■■□□ 2.21
SLC17A8Q8NDX2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC28.83■■■□□ 2.21
SLC17A8Q8NDX2 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
SLC17A8Q8NDX2 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
SLC17A8Q8NDX2 ABCB10P1-201ENST00000614297 2181 ntBASIC28.82■■■□□ 2.2
SLC17A8Q8NDX2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SLC17A8Q8NDX2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
SLC17A8Q8NDX2 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
SLC17A8Q8NDX2 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SLC17A8Q8NDX2 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC28.81■■■□□ 2.2
SLC17A8Q8NDX2 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SLC17A8Q8NDX2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SLC17A8Q8NDX2 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC28.81■■■□□ 2.2
SLC17A8Q8NDX2 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC28.81■■■□□ 2.2
SLC17A8Q8NDX2 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC28.8■■■□□ 2.2
SLC17A8Q8NDX2 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.8■■■□□ 2.2
SLC17A8Q8NDX2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC28.8■■■□□ 2.2
SLC17A8Q8NDX2 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC28.8■■■□□ 2.2
SLC17A8Q8NDX2 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
SLC17A8Q8NDX2 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SLC17A8Q8NDX2 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SLC17A8Q8NDX2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SLC17A8Q8NDX2 MIR6090-201ENST00000622481 60 ntBASIC28.79■■■□□ 2.2
SLC17A8Q8NDX2 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC28.78■■■□□ 2.2
SLC17A8Q8NDX2 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
SLC17A8Q8NDX2 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC28.77■■■□□ 2.2
SLC17A8Q8NDX2 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
SLC17A8Q8NDX2 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
SLC17A8Q8NDX2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC28.75■■■□□ 2.19
SLC17A8Q8NDX2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.75■■■□□ 2.19
SLC17A8Q8NDX2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
SLC17A8Q8NDX2 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
SLC17A8Q8NDX2 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC28.74■■■□□ 2.19
SLC17A8Q8NDX2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC28.74■■■□□ 2.19
SLC17A8Q8NDX2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC28.74■■■□□ 2.19
SLC17A8Q8NDX2 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
SLC17A8Q8NDX2 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
SLC17A8Q8NDX2 HES6-205ENST00000409356 528 ntTSL 2 BASIC28.72■■■□□ 2.19
SLC17A8Q8NDX2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC28.72■■■□□ 2.19
SLC17A8Q8NDX2 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
SLC17A8Q8NDX2 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
SLC17A8Q8NDX2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
SLC17A8Q8NDX2 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC28.72■■■□□ 2.19
SLC17A8Q8NDX2 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC28.71■■■□□ 2.19
SLC17A8Q8NDX2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
SLC17A8Q8NDX2 EI24-212ENST00000615917 1407 ntTSL 2 BASIC28.7■■■□□ 2.19
SLC17A8Q8NDX2 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
SLC17A8Q8NDX2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC28.7■■■□□ 2.18
SLC17A8Q8NDX2 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
SLC17A8Q8NDX2 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.18
SLC17A8Q8NDX2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC28.69■■■□□ 2.18
SLC17A8Q8NDX2 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.69■■■□□ 2.18
SLC17A8Q8NDX2 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SLC17A8Q8NDX2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SLC17A8Q8NDX2 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
SLC17A8Q8NDX2 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SLC17A8Q8NDX2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
SLC17A8Q8NDX2 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SLC17A8Q8NDX2 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC28.67■■■□□ 2.18
SLC17A8Q8NDX2 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC28.67■■■□□ 2.18
SLC17A8Q8NDX2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC28.67■■■□□ 2.18
SLC17A8Q8NDX2 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SLC17A8Q8NDX2 AC127502.1-201ENST00000399971 1502 ntBASIC28.67■■■□□ 2.18
SLC17A8Q8NDX2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
SLC17A8Q8NDX2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
SLC17A8Q8NDX2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.66■■■□□ 2.18
SLC17A8Q8NDX2 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.66■■■□□ 2.18
SLC17A8Q8NDX2 DUX4L13-201ENST00000554103 1267 ntBASIC28.66■■■□□ 2.18
SLC17A8Q8NDX2 DUX4L15-201ENST00000611059 1267 ntBASIC28.66■■■□□ 2.18
SLC17A8Q8NDX2 DUX4L23-201ENST00000615195 1269 ntBASIC28.66■■■□□ 2.18
SLC17A8Q8NDX2 DUX4L24-201ENST00000617576 1269 ntBASIC28.66■■■□□ 2.18
SLC17A8Q8NDX2 DUX4L22-201ENST00000618238 1269 ntBASIC28.66■■■□□ 2.18
SLC17A8Q8NDX2 DUX4L20-201ENST00000619712 1269 ntBASIC28.66■■■□□ 2.18
SLC17A8Q8NDX2 DUX4L21-201ENST00000622058 1269 ntBASIC28.66■■■□□ 2.18
SLC17A8Q8NDX2 DUX4L10-201ENST00000622460 1267 ntBASIC28.66■■■□□ 2.18
SLC17A8Q8NDX2 DUX4L25-201ENST00000624915 1269 ntBASIC28.66■■■□□ 2.18
SLC17A8Q8NDX2 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC28.66■■■□□ 2.18
SLC17A8Q8NDX2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC28.63■■■□□ 2.17
SLC17A8Q8NDX2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC28.63■■■□□ 2.17
SLC17A8Q8NDX2 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
SLC17A8Q8NDX2 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SLC17A8Q8NDX2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
SLC17A8Q8NDX2 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms