Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.44■■□□□ 1.5
ARHGEF39Q8N4T4 CR559946.2-201ENST00000623684 991 ntBASIC24.44■■□□□ 1.5
ARHGEF39Q8N4T4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
ARHGEF39Q8N4T4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.44■■□□□ 1.5
ARHGEF39Q8N4T4 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
ARHGEF39Q8N4T4 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
ARHGEF39Q8N4T4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.43■■□□□ 1.5
ARHGEF39Q8N4T4 MIR3648-2-201ENST00000581792 180 ntBASIC24.43■■□□□ 1.5
ARHGEF39Q8N4T4 MIR3648-1-201ENST00000615959 180 ntBASIC24.43■■□□□ 1.5
ARHGEF39Q8N4T4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
ARHGEF39Q8N4T4 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ARHGEF39Q8N4T4 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.42■■□□□ 1.5
ARHGEF39Q8N4T4 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.42■■□□□ 1.5
ARHGEF39Q8N4T4 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ARHGEF39Q8N4T4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
ARHGEF39Q8N4T4 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ARHGEF39Q8N4T4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.41■■□□□ 1.5
ARHGEF39Q8N4T4 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
ARHGEF39Q8N4T4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ARHGEF39Q8N4T4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ARHGEF39Q8N4T4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ARHGEF39Q8N4T4 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.4■■□□□ 1.5
ARHGEF39Q8N4T4 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
ARHGEF39Q8N4T4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
ARHGEF39Q8N4T4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
ARHGEF39Q8N4T4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.39■■□□□ 1.49
ARHGEF39Q8N4T4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.39■■□□□ 1.49
ARHGEF39Q8N4T4 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
ARHGEF39Q8N4T4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC24.38■■□□□ 1.49
ARHGEF39Q8N4T4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.38■■□□□ 1.49
ARHGEF39Q8N4T4 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC24.38■■□□□ 1.49
ARHGEF39Q8N4T4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.37■■□□□ 1.49
ARHGEF39Q8N4T4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
ARHGEF39Q8N4T4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.37■■□□□ 1.49
ARHGEF39Q8N4T4 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
ARHGEF39Q8N4T4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.37■■□□□ 1.49
ARHGEF39Q8N4T4 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
ARHGEF39Q8N4T4 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
ARHGEF39Q8N4T4 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.36■■□□□ 1.49
ARHGEF39Q8N4T4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
ARHGEF39Q8N4T4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC24.36■■□□□ 1.49
ARHGEF39Q8N4T4 AC016575.1-201ENST00000607026 382 ntBASIC24.36■■□□□ 1.49
ARHGEF39Q8N4T4 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC24.36■■□□□ 1.49
ARHGEF39Q8N4T4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
ARHGEF39Q8N4T4 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ARHGEF39Q8N4T4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.35■■□□□ 1.49
ARHGEF39Q8N4T4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
ARHGEF39Q8N4T4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.35■■□□□ 1.49
ARHGEF39Q8N4T4 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
ARHGEF39Q8N4T4 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
ARHGEF39Q8N4T4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
ARHGEF39Q8N4T4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
ARHGEF39Q8N4T4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
ARHGEF39Q8N4T4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.33■■□□□ 1.49
ARHGEF39Q8N4T4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.33■■□□□ 1.48
ARHGEF39Q8N4T4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.32■■□□□ 1.48
ARHGEF39Q8N4T4 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ARHGEF39Q8N4T4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.32■■□□□ 1.48
ARHGEF39Q8N4T4 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ARHGEF39Q8N4T4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
ARHGEF39Q8N4T4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC24.31■■□□□ 1.48
ARHGEF39Q8N4T4 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
ARHGEF39Q8N4T4 MIR639-201ENST00000384974 98 ntBASIC24.3■■□□□ 1.48
ARHGEF39Q8N4T4 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.3■■□□□ 1.48
ARHGEF39Q8N4T4 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
ARHGEF39Q8N4T4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ARHGEF39Q8N4T4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.29■■□□□ 1.48
ARHGEF39Q8N4T4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.29■■□□□ 1.48
ARHGEF39Q8N4T4 AC100797.4-201ENST00000631653 1827 ntBASIC24.29■■□□□ 1.48
ARHGEF39Q8N4T4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
ARHGEF39Q8N4T4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.29■■□□□ 1.48
ARHGEF39Q8N4T4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
ARHGEF39Q8N4T4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
ARHGEF39Q8N4T4 ABCB10P3-201ENST00000561950 2166 ntBASIC24.29■■□□□ 1.48
ARHGEF39Q8N4T4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.29■■□□□ 1.48
ARHGEF39Q8N4T4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
ARHGEF39Q8N4T4 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.27■■□□□ 1.48
ARHGEF39Q8N4T4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ARHGEF39Q8N4T4 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ARHGEF39Q8N4T4 HLA-V-202ENST00000446817 847 ntBASIC24.27■■□□□ 1.48
ARHGEF39Q8N4T4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ARHGEF39Q8N4T4 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.27■■□□□ 1.48
ARHGEF39Q8N4T4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.27■■□□□ 1.48
ARHGEF39Q8N4T4 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ARHGEF39Q8N4T4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.26■■□□□ 1.47
ARHGEF39Q8N4T4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
ARHGEF39Q8N4T4 AC110285.7-201ENST00000624417 1536 ntBASIC24.25■■□□□ 1.47
ARHGEF39Q8N4T4 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
ARHGEF39Q8N4T4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.24■■□□□ 1.47
ARHGEF39Q8N4T4 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
ARHGEF39Q8N4T4 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ARHGEF39Q8N4T4 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
ARHGEF39Q8N4T4 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ARHGEF39Q8N4T4 AC139426.1-201ENST00000568218 2529 ntBASIC24.22■■□□□ 1.47
ARHGEF39Q8N4T4 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
ARHGEF39Q8N4T4 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
ARHGEF39Q8N4T4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
ARHGEF39Q8N4T4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
ARHGEF39Q8N4T4 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.21■■□□□ 1.47
ARHGEF39Q8N4T4 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 221.5 ms