Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
MRPL55Q7Z7F7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC16.31■□□□□ 0.2
MRPL55Q7Z7F7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC16.31■□□□□ 0.2
MRPL55Q7Z7F7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MRPL55Q7Z7F7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MRPL55Q7Z7F7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MRPL55Q7Z7F7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
MRPL55Q7Z7F7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MRPL55Q7Z7F7 AC005559.1-201ENST00000589661 871 ntBASIC16.3■□□□□ 0.2
MRPL55Q7Z7F7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
MRPL55Q7Z7F7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MRPL55Q7Z7F7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC16.3■□□□□ 0.2
MRPL55Q7Z7F7 HNRNPLP2-201ENST00000568980 1570 ntBASIC16.3■□□□□ 0.2
MRPL55Q7Z7F7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MRPL55Q7Z7F7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC16.29■□□□□ 0.2
MRPL55Q7Z7F7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MRPL55Q7Z7F7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
MRPL55Q7Z7F7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MRPL55Q7Z7F7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MRPL55Q7Z7F7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MRPL55Q7Z7F7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MRPL55Q7Z7F7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MRPL55Q7Z7F7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC16.28■□□□□ 0.2
MRPL55Q7Z7F7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MRPL55Q7Z7F7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPL55Q7Z7F7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
MRPL55Q7Z7F7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPL55Q7Z7F7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MRPL55Q7Z7F7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPL55Q7Z7F7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
MRPL55Q7Z7F7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
MRPL55Q7Z7F7 SUZ12P1-203ENST00000578195 985 ntBASIC16.27■□□□□ 0.2
MRPL55Q7Z7F7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC16.27■□□□□ 0.19
MRPL55Q7Z7F7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
MRPL55Q7Z7F7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC16.26■□□□□ 0.19
MRPL55Q7Z7F7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MRPL55Q7Z7F7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MRPL55Q7Z7F7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
MRPL55Q7Z7F7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MRPL55Q7Z7F7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MRPL55Q7Z7F7 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC16.25■□□□□ 0.19
MRPL55Q7Z7F7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MRPL55Q7Z7F7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC16.25■□□□□ 0.19
MRPL55Q7Z7F7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MRPL55Q7Z7F7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC16.25■□□□□ 0.19
MRPL55Q7Z7F7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
MRPL55Q7Z7F7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MRPL55Q7Z7F7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
MRPL55Q7Z7F7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC16.24■□□□□ 0.19
MRPL55Q7Z7F7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
MRPL55Q7Z7F7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MRPL55Q7Z7F7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MRPL55Q7Z7F7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
MRPL55Q7Z7F7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MRPL55Q7Z7F7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC16.23■□□□□ 0.19
MRPL55Q7Z7F7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
MRPL55Q7Z7F7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MRPL55Q7Z7F7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MRPL55Q7Z7F7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MRPL55Q7Z7F7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MRPL55Q7Z7F7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC16.22■□□□□ 0.19
MRPL55Q7Z7F7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MRPL55Q7Z7F7 AC108673.1-201ENST00000510422 1159 ntBASIC16.22■□□□□ 0.19
MRPL55Q7Z7F7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
MRPL55Q7Z7F7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MRPL55Q7Z7F7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MRPL55Q7Z7F7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MRPL55Q7Z7F7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC16.21■□□□□ 0.19
MRPL55Q7Z7F7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MRPL55Q7Z7F7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
MRPL55Q7Z7F7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MRPL55Q7Z7F7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MRPL55Q7Z7F7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MRPL55Q7Z7F7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC16.21■□□□□ 0.19
MRPL55Q7Z7F7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
MRPL55Q7Z7F7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
MRPL55Q7Z7F7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
MRPL55Q7Z7F7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRPL55Q7Z7F7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRPL55Q7Z7F7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRPL55Q7Z7F7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC16.2■□□□□ 0.18
MRPL55Q7Z7F7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRPL55Q7Z7F7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRPL55Q7Z7F7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MRPL55Q7Z7F7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MRPL55Q7Z7F7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MRPL55Q7Z7F7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MRPL55Q7Z7F7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC16.19■□□□□ 0.18
MRPL55Q7Z7F7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MRPL55Q7Z7F7 BX255925.1-201ENST00000566954 1854 ntBASIC16.18■□□□□ 0.18
MRPL55Q7Z7F7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MRPL55Q7Z7F7 AC100797.4-201ENST00000631653 1827 ntBASIC16.18■□□□□ 0.18
MRPL55Q7Z7F7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MRPL55Q7Z7F7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MRPL55Q7Z7F7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
MRPL55Q7Z7F7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
MRPL55Q7Z7F7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MRPL55Q7Z7F7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MRPL55Q7Z7F7 MIR3665-201ENST00000578708 105 ntBASIC16.17■□□□□ 0.18
MRPL55Q7Z7F7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms