Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.63■■■□□ 2.49
RNF20Q5VTR2 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
RNF20Q5VTR2 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC30.63■■■□□ 2.49
RNF20Q5VTR2 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
RNF20Q5VTR2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC30.62■■■□□ 2.49
RNF20Q5VTR2 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
RNF20Q5VTR2 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
RNF20Q5VTR2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
RNF20Q5VTR2 LINC00273-201ENST00000539813 1452 ntBASIC30.61■■■□□ 2.49
RNF20Q5VTR2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
RNF20Q5VTR2 AC135983.2-203ENST00000454486 1613 ntBASIC30.61■■■□□ 2.49
RNF20Q5VTR2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
RNF20Q5VTR2 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
RNF20Q5VTR2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
RNF20Q5VTR2 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
RNF20Q5VTR2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
RNF20Q5VTR2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
RNF20Q5VTR2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
RNF20Q5VTR2 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.59■■■□□ 2.49
RNF20Q5VTR2 AC100797.4-201ENST00000631653 1827 ntBASIC30.59■■■□□ 2.49
RNF20Q5VTR2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC30.59■■■□□ 2.49
RNF20Q5VTR2 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
RNF20Q5VTR2 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.58■■■□□ 2.49
RNF20Q5VTR2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC30.57■■■□□ 2.48
RNF20Q5VTR2 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.57■■■□□ 2.48
RNF20Q5VTR2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.57■■■□□ 2.48
RNF20Q5VTR2 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
RNF20Q5VTR2 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC30.57■■■□□ 2.48
RNF20Q5VTR2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC30.57■■■□□ 2.48
RNF20Q5VTR2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
RNF20Q5VTR2 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC30.56■■■□□ 2.48
RNF20Q5VTR2 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
RNF20Q5VTR2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
RNF20Q5VTR2 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
RNF20Q5VTR2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC30.56■■■□□ 2.48
RNF20Q5VTR2 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
RNF20Q5VTR2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC30.55■■■□□ 2.48
RNF20Q5VTR2 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
RNF20Q5VTR2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC30.54■■■□□ 2.48
RNF20Q5VTR2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC30.54■■■□□ 2.48
RNF20Q5VTR2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.53■■■□□ 2.48
RNF20Q5VTR2 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
RNF20Q5VTR2 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
RNF20Q5VTR2 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC30.52■■■□□ 2.48
RNF20Q5VTR2 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
RNF20Q5VTR2 WHAMMP2-203ENST00000563942 1603 ntBASIC30.52■■■□□ 2.48
RNF20Q5VTR2 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
RNF20Q5VTR2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
RNF20Q5VTR2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
RNF20Q5VTR2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
RNF20Q5VTR2 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
RNF20Q5VTR2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.5■■■□□ 2.47
RNF20Q5VTR2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
RNF20Q5VTR2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
RNF20Q5VTR2 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC30.49■■■□□ 2.47
RNF20Q5VTR2 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
RNF20Q5VTR2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC30.48■■■□□ 2.47
RNF20Q5VTR2 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
RNF20Q5VTR2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC30.48■■■□□ 2.47
RNF20Q5VTR2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
RNF20Q5VTR2 RPS2P35-201ENST00000443417 897 ntBASIC30.47■■■□□ 2.47
RNF20Q5VTR2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC30.46■■■□□ 2.47
RNF20Q5VTR2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC30.46■■■□□ 2.47
RNF20Q5VTR2 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
RNF20Q5VTR2 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.46■■■□□ 2.47
RNF20Q5VTR2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.46■■■□□ 2.47
RNF20Q5VTR2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC30.46■■■□□ 2.47
RNF20Q5VTR2 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC30.46■■■□□ 2.47
RNF20Q5VTR2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC30.46■■■□□ 2.47
RNF20Q5VTR2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
RNF20Q5VTR2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.45■■■□□ 2.46
RNF20Q5VTR2 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.46
RNF20Q5VTR2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
RNF20Q5VTR2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
RNF20Q5VTR2 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.44■■■□□ 2.46
RNF20Q5VTR2 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
RNF20Q5VTR2 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.43■■■□□ 2.46
RNF20Q5VTR2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
RNF20Q5VTR2 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
RNF20Q5VTR2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
RNF20Q5VTR2 DUX4L29-201ENST00000425409 679 ntBASIC30.41■■■□□ 2.46
RNF20Q5VTR2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
RNF20Q5VTR2 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
RNF20Q5VTR2 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC30.4■■■□□ 2.46
RNF20Q5VTR2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
RNF20Q5VTR2 AP002414.2-202ENST00000590929 1450 ntBASIC30.4■■■□□ 2.46
RNF20Q5VTR2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.4■■■□□ 2.46
RNF20Q5VTR2 AC021231.2-201ENST00000594613 730 ntBASIC30.4■■■□□ 2.46
RNF20Q5VTR2 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
RNF20Q5VTR2 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
RNF20Q5VTR2 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
RNF20Q5VTR2 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC30.38■■■□□ 2.45
RNF20Q5VTR2 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
RNF20Q5VTR2 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
RNF20Q5VTR2 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
RNF20Q5VTR2 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
RNF20Q5VTR2 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC30.35■■■□□ 2.45
RNF20Q5VTR2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
RNF20Q5VTR2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
RNF20Q5VTR2 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms