Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC14.71□□□□□ -0.05
UBR4Q5T4S7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC14.71□□□□□ -0.05
UBR4Q5T4S7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC14.71□□□□□ -0.05
UBR4Q5T4S7 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBR4Q5T4S7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBR4Q5T4S7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
UBR4Q5T4S7 AC060814.1-201ENST00000554326 538 ntBASIC14.69□□□□□ -0.06
UBR4Q5T4S7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
UBR4Q5T4S7 SPCS2P3-201ENST00000500401 656 ntBASIC14.68□□□□□ -0.06
UBR4Q5T4S7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBR4Q5T4S7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC14.68□□□□□ -0.06
UBR4Q5T4S7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
UBR4Q5T4S7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC14.67□□□□□ -0.06
UBR4Q5T4S7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
UBR4Q5T4S7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC14.67□□□□□ -0.06
UBR4Q5T4S7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBR4Q5T4S7 AC104564.3-201ENST00000582367 638 ntBASIC14.66□□□□□ -0.06
UBR4Q5T4S7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBR4Q5T4S7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
UBR4Q5T4S7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UBR4Q5T4S7 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UBR4Q5T4S7 AC103834.1-201ENST00000520383 144 ntBASIC14.65□□□□□ -0.06
UBR4Q5T4S7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC14.65□□□□□ -0.06
UBR4Q5T4S7 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBR4Q5T4S7 AL139246.5-201ENST00000606645 996 ntBASIC14.64□□□□□ -0.07
UBR4Q5T4S7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
UBR4Q5T4S7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBR4Q5T4S7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC14.63□□□□□ -0.07
UBR4Q5T4S7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UBR4Q5T4S7 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBR4Q5T4S7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC14.62□□□□□ -0.07
UBR4Q5T4S7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBR4Q5T4S7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBR4Q5T4S7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC14.62□□□□□ -0.07
UBR4Q5T4S7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
UBR4Q5T4S7 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC14.62□□□□□ -0.07
UBR4Q5T4S7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBR4Q5T4S7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC14.62□□□□□ -0.07
UBR4Q5T4S7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBR4Q5T4S7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UBR4Q5T4S7 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBR4Q5T4S7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UBR4Q5T4S7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC14.6□□□□□ -0.07
UBR4Q5T4S7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBR4Q5T4S7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBR4Q5T4S7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBR4Q5T4S7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UBR4Q5T4S7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC14.59□□□□□ -0.07
UBR4Q5T4S7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBR4Q5T4S7 ILK-212ENST00000532063 1617 ntTSL 2 BASIC14.59□□□□□ -0.07
UBR4Q5T4S7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC14.59□□□□□ -0.07
UBR4Q5T4S7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBR4Q5T4S7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
UBR4Q5T4S7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC14.58□□□□□ -0.07
UBR4Q5T4S7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
UBR4Q5T4S7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC14.58□□□□□ -0.07
UBR4Q5T4S7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
UBR4Q5T4S7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC14.58□□□□□ -0.08
UBR4Q5T4S7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC14.58□□□□□ -0.08
UBR4Q5T4S7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
UBR4Q5T4S7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
UBR4Q5T4S7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC14.57□□□□□ -0.08
UBR4Q5T4S7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBR4Q5T4S7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UBR4Q5T4S7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
UBR4Q5T4S7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
UBR4Q5T4S7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
UBR4Q5T4S7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UBR4Q5T4S7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC14.57□□□□□ -0.08
UBR4Q5T4S7 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBR4Q5T4S7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
UBR4Q5T4S7 AC010980.1-201ENST00000587192 1142 ntBASIC14.56□□□□□ -0.08
UBR4Q5T4S7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UBR4Q5T4S7 BHLHE23-202ENST00000612929 1109 ntBASIC14.55□□□□□ -0.08
UBR4Q5T4S7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC14.55□□□□□ -0.08
UBR4Q5T4S7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC14.55□□□□□ -0.08
UBR4Q5T4S7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBR4Q5T4S7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UBR4Q5T4S7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC14.54□□□□□ -0.08
UBR4Q5T4S7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC14.54□□□□□ -0.08
UBR4Q5T4S7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UBR4Q5T4S7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBR4Q5T4S7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UBR4Q5T4S7 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
UBR4Q5T4S7 AC092296.2-201ENST00000589470 999 ntBASIC14.52□□□□□ -0.08
UBR4Q5T4S7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
UBR4Q5T4S7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
UBR4Q5T4S7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC14.52□□□□□ -0.09
UBR4Q5T4S7 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
UBR4Q5T4S7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC14.52□□□□□ -0.09
UBR4Q5T4S7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC14.51□□□□□ -0.09
UBR4Q5T4S7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBR4Q5T4S7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UBR4Q5T4S7 AL592293.1-201ENST00000502889 1188 ntBASIC14.51□□□□□ -0.09
UBR4Q5T4S7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
UBR4Q5T4S7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBR4Q5T4S7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBR4Q5T4S7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBR4Q5T4S7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UBR4Q5T4S7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms