Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SGO1Q5FBB7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
SGO1Q5FBB7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.8■■□□□ 1.56
SGO1Q5FBB7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.8■■□□□ 1.56
SGO1Q5FBB7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.79■■□□□ 1.56
SGO1Q5FBB7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SGO1Q5FBB7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC24.79■■□□□ 1.56
SGO1Q5FBB7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.79■■□□□ 1.56
SGO1Q5FBB7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
SGO1Q5FBB7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC24.78■■□□□ 1.56
SGO1Q5FBB7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SGO1Q5FBB7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SGO1Q5FBB7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SGO1Q5FBB7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SGO1Q5FBB7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.77■■□□□ 1.56
SGO1Q5FBB7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SGO1Q5FBB7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SGO1Q5FBB7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC24.76■■□□□ 1.55
SGO1Q5FBB7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SGO1Q5FBB7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
SGO1Q5FBB7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
SGO1Q5FBB7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.75■■□□□ 1.55
SGO1Q5FBB7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SGO1Q5FBB7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
SGO1Q5FBB7 AC108673.1-201ENST00000510422 1159 ntBASIC24.75■■□□□ 1.55
SGO1Q5FBB7 MIR6090-201ENST00000622481 60 ntBASIC24.75■■□□□ 1.55
SGO1Q5FBB7 AC100797.4-201ENST00000631653 1827 ntBASIC24.74■■□□□ 1.55
SGO1Q5FBB7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
SGO1Q5FBB7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
SGO1Q5FBB7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.73■■□□□ 1.55
SGO1Q5FBB7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.73■■□□□ 1.55
SGO1Q5FBB7 MIR3665-201ENST00000578708 105 ntBASIC24.73■■□□□ 1.55
SGO1Q5FBB7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
SGO1Q5FBB7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SGO1Q5FBB7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
SGO1Q5FBB7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SGO1Q5FBB7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SGO1Q5FBB7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.72■■□□□ 1.55
SGO1Q5FBB7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.71■■□□□ 1.55
SGO1Q5FBB7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SGO1Q5FBB7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.71■■□□□ 1.55
SGO1Q5FBB7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
SGO1Q5FBB7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC24.7■■□□□ 1.54
SGO1Q5FBB7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SGO1Q5FBB7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
SGO1Q5FBB7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.7■■□□□ 1.54
SGO1Q5FBB7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SGO1Q5FBB7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SGO1Q5FBB7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SGO1Q5FBB7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SGO1Q5FBB7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
SGO1Q5FBB7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SGO1Q5FBB7 AP006261.1-201ENST00000584783 668 ntBASIC24.67■■□□□ 1.54
SGO1Q5FBB7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.66■■□□□ 1.54
SGO1Q5FBB7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
SGO1Q5FBB7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SGO1Q5FBB7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SGO1Q5FBB7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SGO1Q5FBB7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC24.65■■□□□ 1.54
SGO1Q5FBB7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SGO1Q5FBB7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SGO1Q5FBB7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SGO1Q5FBB7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.64■■□□□ 1.54
SGO1Q5FBB7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
SGO1Q5FBB7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SGO1Q5FBB7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SGO1Q5FBB7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
SGO1Q5FBB7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
SGO1Q5FBB7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.63■■□□□ 1.53
SGO1Q5FBB7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SGO1Q5FBB7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SGO1Q5FBB7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.62■■□□□ 1.53
SGO1Q5FBB7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
SGO1Q5FBB7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.61■■□□□ 1.53
SGO1Q5FBB7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24.61■■□□□ 1.53
SGO1Q5FBB7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
SGO1Q5FBB7 AC087741.3-201ENST00000624270 1347 ntBASIC24.61■■□□□ 1.53
SGO1Q5FBB7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.6■■□□□ 1.53
SGO1Q5FBB7 AL162393.1-201ENST00000437852 946 ntBASIC24.6■■□□□ 1.53
SGO1Q5FBB7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
SGO1Q5FBB7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SGO1Q5FBB7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.59■■□□□ 1.53
SGO1Q5FBB7 AC135983.2-203ENST00000454486 1613 ntBASIC24.59■■□□□ 1.53
SGO1Q5FBB7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.59■■□□□ 1.53
SGO1Q5FBB7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.58■■□□□ 1.53
SGO1Q5FBB7 WHAMMP2-203ENST00000563942 1603 ntBASIC24.58■■□□□ 1.53
SGO1Q5FBB7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.53
SGO1Q5FBB7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.58■■□□□ 1.53
SGO1Q5FBB7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SGO1Q5FBB7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.58■■□□□ 1.53
SGO1Q5FBB7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.52
SGO1Q5FBB7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
SGO1Q5FBB7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
SGO1Q5FBB7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SGO1Q5FBB7 BX255925.1-201ENST00000566954 1854 ntBASIC24.57■■□□□ 1.52
SGO1Q5FBB7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SGO1Q5FBB7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SGO1Q5FBB7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SGO1Q5FBB7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
SGO1Q5FBB7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms