Protein–RNA interactions for Protein: Q3ZAQ7

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21Q3ZAQ7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
VMA21Q3ZAQ7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
VMA21Q3ZAQ7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.61■□□□□ 0.89
VMA21Q3ZAQ7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VMA21Q3ZAQ7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VMA21Q3ZAQ7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VMA21Q3ZAQ7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.6■□□□□ 0.89
VMA21Q3ZAQ7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VMA21Q3ZAQ7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VMA21Q3ZAQ7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VMA21Q3ZAQ7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.59■□□□□ 0.89
VMA21Q3ZAQ7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VMA21Q3ZAQ7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VMA21Q3ZAQ7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VMA21Q3ZAQ7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
VMA21Q3ZAQ7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VMA21Q3ZAQ7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VMA21Q3ZAQ7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.58■□□□□ 0.89
VMA21Q3ZAQ7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
VMA21Q3ZAQ7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VMA21Q3ZAQ7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
VMA21Q3ZAQ7 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
VMA21Q3ZAQ7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.56■□□□□ 0.88
VMA21Q3ZAQ7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
VMA21Q3ZAQ7 MIR6090-201ENST00000622481 60 ntBASIC20.56■□□□□ 0.88
VMA21Q3ZAQ7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VMA21Q3ZAQ7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.55■□□□□ 0.88
VMA21Q3ZAQ7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VMA21Q3ZAQ7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VMA21Q3ZAQ7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VMA21Q3ZAQ7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.55■□□□□ 0.88
VMA21Q3ZAQ7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VMA21Q3ZAQ7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VMA21Q3ZAQ7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.55■□□□□ 0.88
VMA21Q3ZAQ7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
VMA21Q3ZAQ7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
VMA21Q3ZAQ7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VMA21Q3ZAQ7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VMA21Q3ZAQ7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
VMA21Q3ZAQ7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VMA21Q3ZAQ7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
VMA21Q3ZAQ7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VMA21Q3ZAQ7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.52■□□□□ 0.88
VMA21Q3ZAQ7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
VMA21Q3ZAQ7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
VMA21Q3ZAQ7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VMA21Q3ZAQ7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.51■□□□□ 0.87
VMA21Q3ZAQ7 AC100797.4-201ENST00000631653 1827 ntBASIC20.51■□□□□ 0.87
VMA21Q3ZAQ7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.51■□□□□ 0.87
VMA21Q3ZAQ7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.51■□□□□ 0.87
VMA21Q3ZAQ7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
VMA21Q3ZAQ7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VMA21Q3ZAQ7 AC044849.2-201ENST00000606596 710 ntBASIC20.5■□□□□ 0.87
VMA21Q3ZAQ7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VMA21Q3ZAQ7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VMA21Q3ZAQ7 AC087741.3-201ENST00000624270 1347 ntBASIC20.5■□□□□ 0.87
VMA21Q3ZAQ7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
VMA21Q3ZAQ7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VMA21Q3ZAQ7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VMA21Q3ZAQ7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
VMA21Q3ZAQ7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
VMA21Q3ZAQ7 AL162393.1-201ENST00000437852 946 ntBASIC20.49■□□□□ 0.87
VMA21Q3ZAQ7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.49■□□□□ 0.87
VMA21Q3ZAQ7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.49■□□□□ 0.87
VMA21Q3ZAQ7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.49■□□□□ 0.87
VMA21Q3ZAQ7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
VMA21Q3ZAQ7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.48■□□□□ 0.87
VMA21Q3ZAQ7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
VMA21Q3ZAQ7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
VMA21Q3ZAQ7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VMA21Q3ZAQ7 AC135983.2-203ENST00000454486 1613 ntBASIC20.48■□□□□ 0.87
VMA21Q3ZAQ7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VMA21Q3ZAQ7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
VMA21Q3ZAQ7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VMA21Q3ZAQ7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
VMA21Q3ZAQ7 LINC00273-201ENST00000539813 1452 ntBASIC20.47■□□□□ 0.87
VMA21Q3ZAQ7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VMA21Q3ZAQ7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
VMA21Q3ZAQ7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
VMA21Q3ZAQ7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VMA21Q3ZAQ7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.46■□□□□ 0.87
VMA21Q3ZAQ7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.46■□□□□ 0.87
VMA21Q3ZAQ7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VMA21Q3ZAQ7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VMA21Q3ZAQ7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
VMA21Q3ZAQ7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
VMA21Q3ZAQ7 BX255925.1-201ENST00000566954 1854 ntBASIC20.44■□□□□ 0.86
VMA21Q3ZAQ7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VMA21Q3ZAQ7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.43■□□□□ 0.86
VMA21Q3ZAQ7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.43■□□□□ 0.86
VMA21Q3ZAQ7 AP002414.2-202ENST00000590929 1450 ntBASIC20.43■□□□□ 0.86
VMA21Q3ZAQ7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VMA21Q3ZAQ7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
VMA21Q3ZAQ7 WHAMMP2-203ENST00000563942 1603 ntBASIC20.42■□□□□ 0.86
VMA21Q3ZAQ7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VMA21Q3ZAQ7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.42■□□□□ 0.86
VMA21Q3ZAQ7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VMA21Q3ZAQ7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VMA21Q3ZAQ7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
VMA21Q3ZAQ7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms