Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 AC100797.4-201ENST00000631653 1827 ntBASIC31.53■■■□□ 2.64
PDE1AP54750 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC31.52■■■□□ 2.64
PDE1AP54750 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
PDE1AP54750 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
PDE1AP54750 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC31.52■■■□□ 2.64
PDE1AP54750 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
PDE1AP54750 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC31.51■■■□□ 2.63
PDE1AP54750 LINC00273-201ENST00000539813 1452 ntBASIC31.51■■■□□ 2.63
PDE1AP54750 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC31.51■■■□□ 2.63
PDE1AP54750 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC31.5■■■□□ 2.63
PDE1AP54750 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
PDE1AP54750 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC31.5■■■□□ 2.63
PDE1AP54750 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
PDE1AP54750 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
PDE1AP54750 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC31.49■■■□□ 2.63
PDE1AP54750 WHAMMP2-203ENST00000563942 1603 ntBASIC31.49■■■□□ 2.63
PDE1AP54750 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
PDE1AP54750 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.48■■■□□ 2.63
PDE1AP54750 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC31.48■■■□□ 2.63
PDE1AP54750 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
PDE1AP54750 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
PDE1AP54750 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
PDE1AP54750 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
PDE1AP54750 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC31.47■■■□□ 2.63
PDE1AP54750 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
PDE1AP54750 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
PDE1AP54750 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
PDE1AP54750 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
PDE1AP54750 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
PDE1AP54750 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC31.45■■■□□ 2.63
PDE1AP54750 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC31.44■■■□□ 2.62
PDE1AP54750 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
PDE1AP54750 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.44■■■□□ 2.62
PDE1AP54750 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC31.44■■■□□ 2.62
PDE1AP54750 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC31.43■■■□□ 2.62
PDE1AP54750 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
PDE1AP54750 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
PDE1AP54750 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
PDE1AP54750 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
PDE1AP54750 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.42■■■□□ 2.62
PDE1AP54750 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
PDE1AP54750 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PDE1AP54750 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PDE1AP54750 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PDE1AP54750 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
PDE1AP54750 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC31.4■■■□□ 2.62
PDE1AP54750 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
PDE1AP54750 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC31.4■■■□□ 2.62
PDE1AP54750 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
PDE1AP54750 MEST-211ENST00000437945 1455 ntTSL 5 BASIC31.4■■■□□ 2.62
PDE1AP54750 AC021231.2-201ENST00000594613 730 ntBASIC31.39■■■□□ 2.62
PDE1AP54750 PROC-203ENST00000409048 1586 ntTSL 5 BASIC31.39■■■□□ 2.61
PDE1AP54750 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PDE1AP54750 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.38■■■□□ 2.61
PDE1AP54750 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PDE1AP54750 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC31.38■■■□□ 2.61
PDE1AP54750 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PDE1AP54750 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC31.38■■■□□ 2.61
PDE1AP54750 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PDE1AP54750 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC31.38■■■□□ 2.61
PDE1AP54750 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC31.36■■■□□ 2.61
PDE1AP54750 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PDE1AP54750 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC31.36■■■□□ 2.61
PDE1AP54750 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC31.35■■■□□ 2.61
PDE1AP54750 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
PDE1AP54750 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
PDE1AP54750 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
PDE1AP54750 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
PDE1AP54750 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
PDE1AP54750 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
PDE1AP54750 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
PDE1AP54750 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
PDE1AP54750 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC31.32■■■□□ 2.6
PDE1AP54750 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PDE1AP54750 DUX4L29-201ENST00000425409 679 ntBASIC31.31■■■□□ 2.6
PDE1AP54750 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
PDE1AP54750 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
PDE1AP54750 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
PDE1AP54750 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC31.28■■■□□ 2.6
PDE1AP54750 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.28■■■□□ 2.6
PDE1AP54750 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.28■■■□□ 2.6
PDE1AP54750 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.28■■■□□ 2.6
PDE1AP54750 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
PDE1AP54750 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
PDE1AP54750 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
PDE1AP54750 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC31.27■■■□□ 2.6
PDE1AP54750 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC31.27■■■□□ 2.6
PDE1AP54750 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
PDE1AP54750 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.26■■■□□ 2.59
PDE1AP54750 AP002414.2-202ENST00000590929 1450 ntBASIC31.26■■■□□ 2.59
PDE1AP54750 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
PDE1AP54750 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
PDE1AP54750 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
PDE1AP54750 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
PDE1AP54750 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.24■■■□□ 2.59
PDE1AP54750 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
PDE1AP54750 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
PDE1AP54750 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
PDE1AP54750 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.23■■■□□ 2.59
PDE1AP54750 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms