Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 MRS4YKR052C 915 nt8.52□□□□□ -1.05
SUB1P54000 IML3YBR107C 738 nt8.52□□□□□ -1.05
SUB1P54000 ADE16YLR028C 1776 nt8.52□□□□□ -1.05
SUB1P54000 LRO1YNR008W 1986 nt8.52□□□□□ -1.05
SUB1P54000 BUD9YGR041W 1644 nt8.51□□□□□ -1.05
SUB1P54000 ADE17YMR120C 1779 nt8.51□□□□□ -1.05
SUB1P54000 YIL108WYIL108W 2091 nt8.51□□□□□ -1.05
SUB1P54000 COG1YGL223C 1254 nt8.51□□□□□ -1.05
SUB1P54000 YMR226CYMR226C 804 nt8.51□□□□□ -1.05
SUB1P54000 YPI1YFR003C 468 nt8.5□□□□□ -1.05
SUB1P54000 SPS100YHR139C 981 nt8.5□□□□□ -1.05
SUB1P54000 MSB3YNL293W 1902 nt8.5□□□□□ -1.05
SUB1P54000 PRP2YNR011C 2631 nt8.49□□□□□ -1.05
SUB1P54000 GGC1YDL198C 903 nt8.49□□□□□ -1.05
SUB1P54000 LEA1YPL213W 717 nt8.49□□□□□ -1.05
SUB1P54000 SAN1YDR143C 1833 nt8.49□□□□□ -1.05
SUB1P54000 ENO2YHR174W 1314 nt8.49□□□□□ -1.05
SUB1P54000 SBP1YHL034C 885 nt8.48□□□□□ -1.05
SUB1P54000 YPR126CYPR126C 309 nt8.48□□□□□ -1.05
SUB1P54000 AMF1YOR378W 1548 nt8.48□□□□□ -1.05
SUB1P54000 snR86snR86 1004 nt8.47□□□□□ -1.05
SUB1P54000 YNR029CYNR029C 1290 nt8.47□□□□□ -1.05
SUB1P54000 ABZ2YMR289W 1125 nt8.45□□□□□ -1.06
SUB1P54000 NSE5YML023C 1671 nt8.45□□□□□ -1.06
SUB1P54000 SPS22YCL048W 1392 nt8.45□□□□□ -1.06
SUB1P54000 PFS2YNL317W 1398 nt8.44□□□□□ -1.06
SUB1P54000 ATF1YOR377W 1578 nt8.44□□□□□ -1.06
SUB1P54000 MPA43YNL249C 1629 nt8.43□□□□□ -1.06
SUB1P54000 FET4YMR319C 1659 nt8.43□□□□□ -1.06
SUB1P54000 ABP1YCR088W 1779 nt8.43□□□□□ -1.06
SUB1P54000 YIL177CYIL177C 5277 nt8.43□□□□□ -1.06
SUB1P54000 HSV2YGR223C 1347 nt8.43□□□□□ -1.06
SUB1P54000 DIA4YHR011W 1341 nt8.43□□□□□ -1.06
SUB1P54000 AIM3YBR108W 2844 nt8.41□□□□□ -1.06
SUB1P54000 CTI6YPL181W 1521 nt8.41□□□□□ -1.06
SUB1P54000 TPC1YGR096W 945 nt8.41□□□□□ -1.06
SUB1P54000 MDH2YOL126C 1134 nt8.41□□□□□ -1.06
SUB1P54000 YFR006WYFR006W 1608 nt8.4□□□□□ -1.06
SUB1P54000 CHS5YLR330W 2016 nt8.39□□□□□ -1.07
SUB1P54000 HXT13YEL069C 1695 nt8.39□□□□□ -1.07
SUB1P54000 YFL052WYFL052W 1398 nt8.37□□□□□ -1.07
SUB1P54000 SRP54YPR088C 1626 nt8.37□□□□□ -1.07
SUB1P54000 TOS2YGR221C 1869 nt8.37□□□□□ -1.07
SUB1P54000 MAS2YHR024C 1449 nt8.37□□□□□ -1.07
SUB1P54000 DAL4YIR028W 1908 nt8.37□□□□□ -1.07
SUB1P54000 MKK1YOR231W 1527 nt8.36□□□□□ -1.07
SUB1P54000 ADH1YOL086C 1047 nt8.36□□□□□ -1.07
SUB1P54000 HIS3YOR202W 663 nt8.36□□□□□ -1.07
SUB1P54000 GAS1YMR307W 1680 nt8.36□□□□□ -1.07
SUB1P54000 HSM3YBR272C 1443 nt8.36□□□□□ -1.07
SUB1P54000 CMR1YDL156W 1569 nt8.35□□□□□ -1.07
SUB1P54000 PTC6YCR079W 1329 nt8.35□□□□□ -1.07
SUB1P54000 LYS20YDL182W 1287 nt8.35□□□□□ -1.07
SUB1P54000 YTH1YPR107C 627 nt8.35□□□□□ -1.07
SUB1P54000 NAM8YHR086W 1572 nt8.35□□□□□ -1.07
SUB1P54000 CCT5YJR064W 1689 nt8.34□□□□□ -1.07
SUB1P54000 ELP3YPL086C 1674 nt8.34□□□□□ -1.07
SUB1P54000 AGP2YBR132C 1791 nt8.33□□□□□ -1.08
SUB1P54000 YJL009WYJL009W 327 nt8.33□□□□□ -1.08
SUB1P54000 LEU2YCL018W 1095 nt8.33□□□□□ -1.08
SUB1P54000 GYP8YFL027C 1494 nt8.32□□□□□ -1.08
SUB1P54000 HMS2YJR147W 1077 nt8.32□□□□□ -1.08
SUB1P54000 MEP1YGR121C 1479 nt8.32□□□□□ -1.08
SUB1P54000 TMS1YDR105C 1422 nt8.31□□□□□ -1.08
SUB1P54000 SLM3YDL033C 1254 nt8.31□□□□□ -1.08
SUB1P54000 PMT7YDR307W 1989 nt8.31□□□□□ -1.08
SUB1P54000 GAA1YLR088W 1845 nt8.31□□□□□ -1.08
SUB1P54000 TFC6YDR362C 2019 nt8.3□□□□□ -1.08
SUB1P54000 PAR32YDL173W 888 nt8.29□□□□□ -1.08
SUB1P54000 CDC13YDL220C 2775 nt8.29□□□□□ -1.08
SUB1P54000 NDE2YDL085W 1638 nt8.29□□□□□ -1.08
SUB1P54000 INP54YOL065C 1155 nt8.28□□□□□ -1.08
SUB1P54000 REX2YLR059C 810 nt8.27□□□□□ -1.09
SUB1P54000 PUS5YLR165C 765 nt8.27□□□□□ -1.09
SUB1P54000 AIM34YMR003W 597 nt8.26□□□□□ -1.09
SUB1P54000 YBL070CYBL070C 321 nt8.26□□□□□ -1.09
SUB1P54000 YJR149WYJR149W 1215 nt8.25□□□□□ -1.09
SUB1P54000 YBR056WYBR056W 1506 nt8.24□□□□□ -1.09
SUB1P54000 RBG2YGR173W 1107 nt8.24□□□□□ -1.09
SUB1P54000 MHF1YOL086W-A 273 nt8.24□□□□□ -1.09
SUB1P54000 INO1YJL153C 1602 nt8.24□□□□□ -1.09
SUB1P54000 CHA1YCL064C 1083 nt8.23□□□□□ -1.09
SUB1P54000 CDC11YJR076C 1248 nt8.23□□□□□ -1.09
SUB1P54000 YNL140CYNL140C 570 nt8.23□□□□□ -1.09
SUB1P54000 HST2YPL015C 1074 nt8.23□□□□□ -1.09
SUB1P54000 YPL264CYPL264C 1062 nt8.23□□□□□ -1.09
SUB1P54000 MRN1YPL184C 1839 nt8.23□□□□□ -1.09
SUB1P54000 SGE1YPR198W 1632 nt8.22□□□□□ -1.09
SUB1P54000 TIF3YPR163C 1311 nt8.22□□□□□ -1.09
SUB1P54000 YRF1-1YDR545W 5391 nt8.22□□□□□ -1.09
SUB1P54000 YRF1-5YLR467W 5391 nt8.22□□□□□ -1.09
SUB1P54000 YRF1-8YOR396W 5391 nt8.22□□□□□ -1.09
SUB1P54000 YNL040WYNL040W 1371 nt8.22□□□□□ -1.09
SUB1P54000 FHN1YGR131W 525 nt8.21□□□□□ -1.1
SUB1P54000 TOP3YLR234W 1971 nt8.21□□□□□ -1.1
SUB1P54000 PRC1YMR297W 1599 nt8.2□□□□□ -1.1
SUB1P54000 SPE2YOL052C 1191 nt8.2□□□□□ -1.1
SUB1P54000 YPT11YNL304W 1254 nt8.19□□□□□ -1.1
SUB1P54000 YER152CYER152C 1332 nt8.19□□□□□ -1.1
SUB1P54000 WSC4YHL028W 1818 nt8.19□□□□□ -1.1
Retrieved 100 of 7,029 protein–RNA pairs in 39.3 ms