RNA–Protein interactions for RNA: YDL156W

CMR1, Transcript of DNA-binding protein with preference for UV-damaged DNA, yeastyeast

Gene CMR1, Length 1,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMR1YDL156W MTC1P47018 478 aaKnown RBP13.95□□□□□ -0.18
CMR1YDL156W FAP1P53971 965 aa13.7□□□□□ -0.22
CMR1YDL156W DRS1P32892 752 aaKnown RBP13.19□□□□□ -0.3
CMR1YDL156W PRY3P47033 881 aa12.87□□□□□ -0.35
CMR1YDL156W AAD16Q02895 342 aa12.37□□□□□ -0.43
CMR1YDL156W TFA1P36100 482 aa12.3□□□□□ -0.44
CMR1YDL156W PRI1P10363 409 aa12.27□□□□□ -0.44
CMR1YDL156W HAA1Q12753 694 aaKnown RBP12.06□□□□□ -0.48
CMR1YDL156W BFR2Q06631 534 aaKnown RBP12.03□□□□□ -0.48
CMR1YDL156W RQC2Q12532 1038 aaKnown RBP11.94□□□□□ -0.5
CMR1YDL156W YCK3P39962 524 aa11.91□□□□□ -0.5
CMR1YDL156W ISW2Q08773 1120 aa11.86□□□□□ -0.51
CMR1YDL156W RPG1P38249 964 aaKnown RBP11.7□□□□□ -0.54
CMR1YDL156W TSR3Q12094 313 aaKnown RBP11.56□□□□□ -0.56
CMR1YDL156W TAF7Q05021 590 aa11.42□□□□□ -0.58
CMR1YDL156W MRPL32P25348 183 aa11.2□□□□□ -0.62
CMR1YDL156W AVT3P36062 692 aa11.02□□□□□ -0.65
CMR1YDL156W YGL015CP33199 130 aa11□□□□□ -0.65
CMR1YDL156W DIP2Q12220 943 aaPredicted RBP10.98□□□□□ -0.65
CMR1YDL156W RSE1Q04693 1361 aaKnown RBP10.91□□□□□ -0.66
CMR1YDL156W REB1P21538 810 aa10.69□□□□□ -0.7
CMR1YDL156W DMA1P38823 416 aa10.62□□□□□ -0.71
CMR1YDL156W RPL17AP05740 184 aaKnown RBP10.6□□□□□ -0.71
CMR1YDL156W RPL17BP46990 184 aaKnown RBP10.6□□□□□ -0.71
CMR1YDL156W LEO1P38439 464 aa10.5□□□□□ -0.73
CMR1YDL156W BUD31P25337 157 aaPredicted RBP10.42□□□□□ -0.74
CMR1YDL156W CDC27P38042 758 aa10.34□□□□□ -0.75
CMR1YDL156W UBP10P53874 792 aaPredicted RBP10.25□□□□□ -0.77
CMR1YDL156W MAP2P38174 421 aaKnown RBP10.16□□□□□ -0.78
CMR1YDL156W YKR023WP36119 530 aaKnown RBP10.09□□□□□ -0.79
CMR1YDL156W SPT21P35209 758 aa9.97□□□□□ -0.81
CMR1YDL156W TIF4632P39936 914 aaKnown RBP9.93□□□□□ -0.82
CMR1YDL156W SIS1P25294 352 aaKnown RBP9.92□□□□□ -0.82
CMR1YDL156W HOP09932 586 aa9.92□□□□□ -0.82
CMR1YDL156W TFC8Q12308 588 aa9.91□□□□□ -0.82
CMR1YDL156W LEU3P08638 886 aa9.9□□□□□ -0.82
CMR1YDL156W UBP9P39967 754 aa9.9□□□□□ -0.82
CMR1YDL156W DCD1P06773 312 aa9.87□□□□□ -0.83
CMR1YDL156W TGL3P40308 642 aa9.83□□□□□ -0.84
CMR1YDL156W SCY1P53009 804 aa9.82□□□□□ -0.84
CMR1YDL156W PTP3P40048 928 aa9.8□□□□□ -0.84
CMR1YDL156W SLX5P32828 619 aaKnown RBP9.79□□□□□ -0.84
CMR1YDL156W SAS10Q12136 610 aaPredicted RBP9.67□□□□□ -0.86
CMR1YDL156W DMA2P53924 522 aa9.58□□□□□ -0.88
CMR1YDL156W BCH2P36122 765 aa9.54□□□□□ -0.88
CMR1YDL156W RPN1P38764 993 aaKnown RBP9.5□□□□□ -0.89
CMR1YDL156W SSP1P38871 571 aa9.5□□□□□ -0.89
CMR1YDL156W RLF2Q12495 606 aa9.5□□□□□ -0.89
CMR1YDL156W AIM44Q99299 758 aa9.49□□□□□ -0.89
CMR1YDL156W RIM101P33400 625 aa9.46□□□□□ -0.9
CMR1YDL156W ABP1P15891 592 aaKnown RBP9.41□□□□□ -0.9
CMR1YDL156W IFH1P39520 1085 aa9.4□□□□□ -0.9
CMR1YDL156W NAP1P25293 417 aaKnown RBP9.35□□□□□ -0.91
CMR1YDL156W EPS1P40557 701 aa9.26□□□□□ -0.93
CMR1YDL156W CKB1P43639 278 aa9.26□□□□□ -0.93
CMR1YDL156W YOR238WQ08634 303 aa9.26□□□□□ -0.93
CMR1YDL156W YBL029C-AQ3E756 94 aa9.26□□□□□ -0.93
CMR1YDL156W MST1P07236 462 aa9.24□□□□□ -0.93
CMR1YDL156W BDF1P35817 686 aa9.24□□□□□ -0.93
CMR1YDL156W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.22□□□□□ -0.93not detected
CMR1YDL156W IOC4Q04213 475 aa9.18□□□□□ -0.94
CMR1YDL156W ORC1P54784 914 aaPredicted RBP9.14□□□□□ -0.95
CMR1YDL156W VNX1P42839 908 aa9.13□□□□□ -0.95
CMR1YDL156W YIL055CP40523 627 aaKnown RBP9.12□□□□□ -0.95
CMR1YDL156W SPP1Q03012 353 aa9.12□□□□□ -0.95
CMR1YDL156W NSR1P27476 414 aaKnown RBP RIP-Chip data9.08□□□□□ -0.96not detected
CMR1YDL156W OXP1P28273 1286 aa9.07□□□□□ -0.96
CMR1YDL156W SPB4P25808 606 aaPredicted RBP9.06□□□□□ -0.96
CMR1YDL156W YAP5P40574 245 aa9.05□□□□□ -0.96
CMR1YDL156W YJL171CP46992 396 aa9.05□□□□□ -0.96
CMR1YDL156W YAH1Q12184 172 aaKnown RBP9.05□□□□□ -0.96
CMR1YDL156W BBC1P47068 1157 aa9.04□□□□□ -0.96
CMR1YDL156W WSC3Q12215 556 aa9.03□□□□□ -0.96
CMR1YDL156W MGA2P40578 1113 aa9.02□□□□□ -0.97
CMR1YDL156W YLR271WQ06152 274 aa9.02□□□□□ -0.97
CMR1YDL156W YML020WQ03722 664 aa9.01□□□□□ -0.97
CMR1YDL156W HGH1P48362 394 aaKnown RBP9□□□□□ -0.97
CMR1YDL156W NOP8Q08287 484 aaPredicted RBP8.97□□□□□ -0.97
CMR1YDL156W GTT3P39996 337 aa8.95□□□□□ -0.98
CMR1YDL156W TIF11P38912 153 aaKnown RBP8.94□□□□□ -0.98
CMR1YDL156W AIR2Q12476 344 aaKnown RBP8.93□□□□□ -0.98
CMR1YDL156W RSM7P47150 247 aa8.91□□□□□ -0.98
CMR1YDL156W KIN1P13185 1064 aa8.9□□□□□ -0.98
CMR1YDL156W YPR148CQ06523 435 aa8.9□□□□□ -0.99
CMR1YDL156W AI2P03876 854 aa8.89□□□□□ -0.99
CMR1YDL156W FKH1P40466 484 aa8.89□□□□□ -0.99
CMR1YDL156W SLX8P40072 274 aa8.86□□□□□ -0.99
CMR1YDL156W VPS70P47161 811 aa8.86□□□□□ -0.99
CMR1YDL156W YNR021WP53723 404 aaKnown RBP8.85□□□□□ -0.99
CMR1YDL156W DSF2P38213 736 aa8.82□□□□□ -1
CMR1YDL156W NOP7P53261 605 aaKnown RBP8.82□□□□□ -1
CMR1YDL156W SET1P38827 1080 aaKnown RBP8.82□□□□□ -1
CMR1YDL156W URN1Q06525 465 aaKnown RBP8.82□□□□□ -1
CMR1YDL156W SSA1P10591 642 aaKnown RBP8.8□□□□□ -1
CMR1YDL156W GEF1P37020 779 aa8.8□□□□□ -1
CMR1YDL156W CST9Q06032 482 aa8.8□□□□□ -1
CMR1YDL156W BMT6Q12291 365 aa8.8□□□□□ -1
CMR1YDL156W LDB19Q12502 818 aa8.79□□□□□ -1
CMR1YDL156W ULI1P43604 169 aa8.78□□□□□ -1
CMR1YDL156W AIM7Q12156 149 aa8.77□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 11 ms