Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 FOXK2-204ENST00000527313 779 ntTSL 318.75■□□□□ 0.596e-7■■■■■ 32.1
NCBP2P52298 FOXK2-202ENST00000473637 3462 ntTSL 1 (best)18.69■□□□□ 0.586e-7■■■■■ 32.1
NCBP2P52298 FAAP20-205ENST00000401813 2543 ntTSL 1 (best)17.9■□□□□ 0.466e-7■■■■■ 32.1
NCBP2P52298 CD63-213ENST00000552164 845 ntTSL 217.36■□□□□ 0.376e-7■■■■■ 32.1
NCBP2P52298 CD63-211ENST00000551173 788 ntTSL 316.63■□□□□ 0.256e-7■■■■■ 32.1
NCBP2P52298 FAAP20-211ENST00000469733 2280 ntTSL 216.26■□□□□ 0.196e-7■■■■■ 32.1
NCBP2P52298 CD63-209ENST00000550050 829 ntTSL 513.81□□□□□ -0.26e-7■■■■■ 32.1
NCBP2P52298 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.216e-7■■■■■ 32.1
NCBP2P52298 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.36e-7■■■■■ 32.1
NCBP2P52298 CD63-203ENST00000546457 607 ntTSL 212.87□□□□□ -0.356e-7■■■■■ 32.1
NCBP2P52298 FAAP20-213ENST00000487186 3576 ntTSL 212.45□□□□□ -0.426e-7■■■■■ 32.1
NCBP2P52298 FOXK2-207ENST00000570585 756 ntTSL 312.39□□□□□ -0.436e-7■■■■■ 32.1
NCBP2P52298 CD63-215ENST00000552754 682 ntTSL 1 (best) BASIC10.87□□□□□ -0.676e-7■■■■■ 32.1
NCBP2P52298 UBE2F-SCLY-202ENST00000449891 2902 ntAPPRIS ALT2 TSL 212.45□□□□□ -0.421e-12■■■■■ 32
NCBP2P52298 UBE2F-SCLY-201ENST00000449191 951 ntAPPRIS P5 TSL 3 BASIC9.05□□□□□ -0.961e-12■■■■■ 32
NCBP2P52298 ANO9-207ENST00000532094 5487 ntTSL 217.02■□□□□ 0.318e-7■■■■■ 32
NCBP2P52298 ANO9-206ENST00000528927 2639 ntTSL 1 (best)15.28■□□□□ 0.048e-7■■■■■ 32
NCBP2P52298 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.298e-7■■■■■ 32
NCBP2P52298 C7orf43-203ENST00000419037 2200 ntTSL 521.21■□□□□ 0.992e-7■■■■■ 32
NCBP2P52298 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.642e-7■■■■■ 32
NCBP2P52298 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.95■□□□□ 0.622e-7■■■■■ 32
NCBP2P52298 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.031e-7■■■■■ 31.9
NCBP2P52298 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.31e-7■■■■■ 31.9
NCBP2P52298 PNRC2-203ENST00000471915 380 ntTSL 39.82□□□□□ -0.841e-7■■■■■ 31.9
NCBP2P52298 AC093323.1-202ENST00000635031 2045 ntBASIC22.09■■□□□ 1.133e-17■■■■■ 31.9
NCBP2P52298 AC093323.1-203ENST00000444232 1605 ntTSL 1 (best)21.55■■□□□ 1.043e-17■■■■■ 31.9
NCBP2P52298 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.955e-9■■■■■ 31.9
NCBP2P52298 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.56■□□□□ 0.883e-17■■■■■ 31.9
NCBP2P52298 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.075e-9■■■■■ 31.9
NCBP2P52298 UPF3B-204ENST00000619445 1385 ntTSL 5 BASIC10.8□□□□□ -0.685e-9■■■■■ 31.9
NCBP2P52298 UPF3B-201ENST00000276201 2378 ntTSL 1 (best) BASIC9.48□□□□□ -0.895e-9■■■■■ 31.9
NCBP2P52298 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC8.52□□□□□ -1.055e-9■■■■■ 31.9
NCBP2P52298 AKR1D1-205ENST00000468877 1208 ntTSL 25.99□□□□□ -1.455e-9■■■■■ 31.9
NCBP2P52298 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.07■□□□□ 0.322e-8■■■■■ 31.9
NCBP2P52298 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.092e-8■■■■■ 31.9
NCBP2P52298 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.4■□□□□ 0.224e-8■■■■■ 31.8
NCBP2P52298 NT5C2-207ENST00000461461 902 ntTSL 516.4■□□□□ 0.224e-8■■■■■ 31.8
NCBP2P52298 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.274e-8■■■■■ 31.8
NCBP2P52298 NT5C2-202ENST00000369857 2625 ntTSL 25.95□□□□□ -1.464e-8■■■■■ 31.8
NCBP2P52298 NT5C2-205ENST00000452156 856 ntTSL 53.8□□□□□ -1.84e-8■■■■■ 31.8
NCBP2P52298 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.542e-8■■■■■ 31.8
NCBP2P52298 SMIM15-201ENST00000339020 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.612e-8■■■■■ 31.8
NCBP2P52298 CBLB-208ENST00000447441 944 ntTSL 218.66■□□□□ 0.586e-8■■■■■ 31.8
NCBP2P52298 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.93□□□□□ -0.346e-8■■■■■ 31.8
NCBP2P52298 CBLB-201ENST00000264122 6780 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.636e-8■■■■■ 31.8
NCBP2P52298 CBLB-203ENST00000403724 3350 ntTSL 2 BASIC10.99□□□□□ -0.656e-8■■■■■ 31.8
NCBP2P52298 CBLB-206ENST00000438603 519 ntTSL 48.04□□□□□ -1.126e-8■■■■■ 31.8
NCBP2P52298 CBLB-207ENST00000443752 561 ntTSL 37.67□□□□□ -1.186e-8■■■■■ 31.8
NCBP2P52298 SBNO2-205ENST00000587655 914 ntTSL 313.86□□□□□ -0.193e-6■■■■■ 31.7
NCBP2P52298 ANKRD46-208ENST00000521345 592 ntTSL 417.47■□□□□ 0.397e-9■■■■■ 31.7
NCBP2P52298 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.137e-9■■■■■ 31.7
NCBP2P52298 ANKRD46-202ENST00000358990 661 ntTSL 310.49□□□□□ -0.737e-9■■■■■ 31.7
NCBP2P52298 ANKRD46-206ENST00000520552 1686 ntTSL 1 (best) BASIC9.44□□□□□ -0.97e-9■■■■■ 31.7
NCBP2P52298 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.437e-9■■■■■ 31.7
NCBP2P52298 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.547e-9■■■■■ 31.7
NCBP2P52298 ANKRD46-209ENST00000523000 567 ntTSL 44.95□□□□□ -1.627e-9■■■■■ 31.7
NCBP2P52298 ARVCF-206ENST00000467828 258 ntTSL 317.55■□□□□ 0.44e-7■■■■■ 31.6
NCBP2P52298 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.024e-7■■■■■ 31.6
NCBP2P52298 DDX17-203ENST00000403230 2322 ntAPPRIS ALT2 TSL 1 (best)15.48■□□□□ 0.071e-40■■■■■ 31.5
NCBP2P52298 DDX17-209ENST00000479734 441 ntTSL 414.57□□□□□ -0.081e-40■■■■■ 31.5
NCBP2P52298 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.131e-40■■■■■ 31.5
NCBP2P52298 DDX17-201ENST00000216019 6441 ntTSL 1 (best)12.69□□□□□ -0.381e-40■■■■■ 31.5
NCBP2P52298 DDX17-205ENST00000432525 1354 ntTSL 29.96□□□□□ -0.821e-40■■■■■ 31.5
NCBP2P52298 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.07■□□□□ 0.643e-6■■■■■ 31.5
NCBP2P52298 SSH3-209ENST00000532600 555 ntTSL 417.22■□□□□ 0.353e-6■■■■■ 31.5
NCBP2P52298 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.093e-6■■■■■ 31.5
NCBP2P52298 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.85□□□□□ -0.033e-6■■■■■ 31.5
NCBP2P52298 SSH3-210ENST00000532881 2587 ntTSL 1 (best)14.07□□□□□ -0.163e-6■■■■■ 31.5
NCBP2P52298 ZNF425-202ENST00000483014 541 ntTSL 421.31■■□□□ 12e-8■■■■■ 31.4
NCBP2P52298 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.022e-8■■■■■ 31.4
NCBP2P52298 HERC4-214ENST00000513996 944 ntTSL 37.97□□□□□ -1.137e-8■■■■■ 31.4
NCBP2P52298 HERC4-203ENST00000395185 625 ntTSL 47.88□□□□□ -1.157e-8■■■■■ 31.4
NCBP2P52298 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.217e-8■■■■■ 31.4
NCBP2P52298 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.58□□□□□ -1.367e-8■■■■■ 31.4
NCBP2P52298 HERC4-209ENST00000473533 3593 ntTSL 1 (best)5.75□□□□□ -1.497e-8■■■■■ 31.4
NCBP2P52298 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.35□□□□□ -1.717e-8■■■■■ 31.4
NCBP2P52298 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.887e-8■■■■■ 31.4
NCBP2P52298 EML6-209ENST00000496970 462 ntTSL 318.69■□□□□ 0.583e-8■■■■■ 31.4
NCBP2P52298 EML6-207ENST00000491655 471 ntTSL 417.58■□□□□ 0.43e-8■■■■■ 31.4
NCBP2P52298 RBBP6-211ENST00000568316 556 ntTSL 523.15■■□□□ 1.31e-14■■■■■ 31.3
NCBP2P52298 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC22.98■■□□□ 1.273e-8■■■■■ 31.3
NCBP2P52298 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.54■□□□□ 0.563e-8■■■■■ 31.3
NCBP2P52298 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.13■□□□□ 0.333e-8■■■■■ 31.3
NCBP2P52298 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.37■□□□□ 0.213e-8■■■■■ 31.3
NCBP2P52298 RIOK1-203ENST00000475351 960 ntTSL 1 (best)16.1■□□□□ 0.173e-9■■■■■ 31.3
NCBP2P52298 MATR3-235ENST00000506147 580 ntTSL 414.87□□□□□ -0.032e-15■■■■■ 31.3
NCBP2P52298 RBBP6-210ENST00000568015 695 ntTSL 314.84□□□□□ -0.031e-14■■■■■ 31.3
NCBP2P52298 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.094e-11■■■■■ 31.3
NCBP2P52298 MATR3-239ENST00000514694 587 ntTSL 414.29□□□□□ -0.122e-15■■■■■ 31.3
NCBP2P52298 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.193e-8■■■■■ 31.3
NCBP2P52298 MATR3-238ENST00000512107 579 ntTSL 413.55□□□□□ -0.242e-15■■■■■ 31.3
NCBP2P52298 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.263e-9■■■■■ 31.3
NCBP2P52298 SNHG4-203ENST00000506188 801 ntTSL 412.89□□□□□ -0.352e-15■■■■■ 31.3
NCBP2P52298 SNHG4-201ENST00000448190 542 ntTSL 412.38□□□□□ -0.432e-15■■■■■ 31.3
NCBP2P52298 MATR3-233ENST00000504203 2243 ntTSL 2 BASIC12.32□□□□□ -0.442e-15■■■■■ 31.3
NCBP2P52298 MATR3-237ENST00000509990 3249 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.542e-15■■■■■ 31.3
NCBP2P52298 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC11.61□□□□□ -0.552e-15■■■■■ 31.3
NCBP2P52298 MATR3-236ENST00000509644 750 ntTSL 311.52□□□□□ -0.572e-15■■■■■ 31.3
NCBP2P52298 SNHG4-206ENST00000508735 310 ntTSL 1 (best)11.03□□□□□ -0.642e-15■■■■■ 31.3
NCBP2P52298 MATR3-234ENST00000505016 664 ntTSL 211.03□□□□□ -0.642e-15■■■■■ 31.3
Retrieved 100 of 18,329 protein–RNA pairs in 60.5 ms