Protein–RNA interactions for Protein: P46963

CTK3, CTD kinase subunit gamma, yeastyeast

Predicted RBP Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTK3P46963 tA(AGC)DtA(AGC)D 73 nt8.44□□□□□ -1.06
CTK3P46963 tA(AGC)FtA(AGC)F 73 nt8.44□□□□□ -1.06
CTK3P46963 tA(AGC)GtA(AGC)G 73 nt8.44□□□□□ -1.06
CTK3P46963 tA(AGC)HtA(AGC)H 73 nt8.44□□□□□ -1.06
CTK3P46963 tA(AGC)JtA(AGC)J 73 nt8.44□□□□□ -1.06
CTK3P46963 tA(AGC)K1tA(AGC)K1 73 nt8.44□□□□□ -1.06
CTK3P46963 tA(AGC)K2tA(AGC)K2 73 nt8.44□□□□□ -1.06
CTK3P46963 tA(AGC)LtA(AGC)L 73 nt8.44□□□□□ -1.06
CTK3P46963 tA(AGC)M1tA(AGC)M1 73 nt8.44□□□□□ -1.06
CTK3P46963 tA(AGC)M2tA(AGC)M2 73 nt8.44□□□□□ -1.06
CTK3P46963 tA(AGC)PtA(AGC)P 73 nt8.44□□□□□ -1.06
CTK3P46963 RIB1YBL033C 1038 nt8.44□□□□□ -1.06
CTK3P46963 TOM71YHR117W 1920 nt8.44□□□□□ -1.06
CTK3P46963 BUD31YCR063W 474 nt8.43□□□□□ -1.06
CTK3P46963 INM1YHR046C 888 nt8.43□□□□□ -1.06
CTK3P46963 ATP10YLR393W 840 nt8.43□□□□□ -1.06
CTK3P46963 IPL1YPL209C 1104 nt8.43□□□□□ -1.06
CTK3P46963 DTR1YBR180W 1719 nt8.43□□□□□ -1.06
CTK3P46963 YCP4YCR004C 744 nt8.42□□□□□ -1.06
CTK3P46963 RRT6YGL146C 936 nt8.42□□□□□ -1.06
CTK3P46963 YMR253CYMR253C 1245 nt8.42□□□□□ -1.06
CTK3P46963 TGL5YOR081C 2250 nt8.42□□□□□ -1.06
CTK3P46963 YIA6YIL006W 1122 nt8.41□□□□□ -1.06
CTK3P46963 BUB2YMR055C 921 nt8.41□□□□□ -1.06
CTK3P46963 SPE2YOL052C 1191 nt8.41□□□□□ -1.06
CTK3P46963 THP3YPR045C 1413 nt8.4□□□□□ -1.06
CTK3P46963 RPL2AYFR031C-A 765 nt8.4□□□□□ -1.06
CTK3P46963 PMT1YDL095W 2454 nt8.39□□□□□ -1.07
CTK3P46963 ERR3YMR323W 1314 nt8.39□□□□□ -1.07
CTK3P46963 ERR1YOR393W 1314 nt8.39□□□□□ -1.07
CTK3P46963 ERR2YPL281C 1314 nt8.39□□□□□ -1.07
CTK3P46963 FRT1YOR324C 1809 nt8.39□□□□□ -1.07
CTK3P46963 DIP5YPL265W 1827 nt8.39□□□□□ -1.07
CTK3P46963 PMA2YPL036W 2844 nt8.39□□□□□ -1.07
CTK3P46963 YPT11YNL304W 1254 nt8.39□□□□□ -1.07
CTK3P46963 KRE1YNL322C 942 nt8.39□□□□□ -1.07
CTK3P46963 SAM50YNL026W 1455 nt8.38□□□□□ -1.07
CTK3P46963 KTR4YBR199W 1395 nt8.37□□□□□ -1.07
CTK3P46963 SWM1YDR260C 513 nt8.37□□□□□ -1.07
CTK3P46963 FLX1YIL134W 936 nt8.36□□□□□ -1.07
CTK3P46963 YCR025CYCR025C 411 nt8.35□□□□□ -1.07
CTK3P46963 GGC1YDL198C 903 nt8.35□□□□□ -1.07
CTK3P46963 SOD2YHR008C 702 nt8.35□□□□□ -1.07
CTK3P46963 TDA4YJR116W 840 nt8.35□□□□□ -1.07
CTK3P46963 MRP7YNL005C 1116 nt8.35□□□□□ -1.07
CTK3P46963 TPO1YLL028W 1761 nt8.35□□□□□ -1.07
CTK3P46963 EHT1YBR177C 1356 nt8.35□□□□□ -1.07
CTK3P46963 ARO3YDR035W 1113 nt8.34□□□□□ -1.07
CTK3P46963 PHB2YGR231C 933 nt8.34□□□□□ -1.07
CTK3P46963 YIR035CYIR035C 765 nt8.34□□□□□ -1.07
CTK3P46963 FSH2YMR222C 672 nt8.34□□□□□ -1.07
CTK3P46963 YKR012CYKR012C 378 nt8.33□□□□□ -1.08
CTK3P46963 RSC9YML127W 1746 nt8.33□□□□□ -1.08
CTK3P46963 ELP6YMR312W 822 nt8.33□□□□□ -1.08
CTK3P46963 YLR030WYLR030W 792 nt8.32□□□□□ -1.08
CTK3P46963 ADH3YMR083W 1128 nt8.31□□□□□ -1.08
CTK3P46963 PDC5YLR134W 1692 nt8.3□□□□□ -1.08
CTK3P46963 CTF3YLR381W 2202 nt8.3□□□□□ -1.08
CTK3P46963 AVL9YLR114C 2295 nt8.3□□□□□ -1.08
CTK3P46963 MTC6YHR151C 1581 nt8.3□□□□□ -1.08
CTK3P46963 ALG7YBR243C 1347 nt8.29□□□□□ -1.08
CTK3P46963 SNA3YJL151C 402 nt8.29□□□□□ -1.08
CTK3P46963 VBA3YCL069W 1377 nt8.29□□□□□ -1.08
CTK3P46963 ATO2YNR002C 849 nt8.28□□□□□ -1.08
CTK3P46963 AQR1YNL065W 1761 nt8.27□□□□□ -1.08
CTK3P46963 POB3YML069W 1659 nt8.27□□□□□ -1.08
CTK3P46963 SDS24YBR214W 1584 nt8.27□□□□□ -1.09
CTK3P46963 YKR018CYKR018C 2178 nt8.27□□□□□ -1.09
CTK3P46963 YER152W-AYER152W-A 567 nt8.27□□□□□ -1.09
CTK3P46963 BSP1YPR171W 1731 nt8.26□□□□□ -1.09
CTK3P46963 CKB1YGL019W 837 nt8.26□□□□□ -1.09
CTK3P46963 RSM7YJR113C 744 nt8.26□□□□□ -1.09
CTK3P46963 PEX28YHR150W 1740 nt8.26□□□□□ -1.09
CTK3P46963 YER137CYER137C 447 nt8.25□□□□□ -1.09
CTK3P46963 SER2YGR208W 930 nt8.25□□□□□ -1.09
CTK3P46963 RNA170RNA170 169 nt8.24□□□□□ -1.09
CTK3P46963 MOB1YIL106W 945 nt8.23□□□□□ -1.09
CTK3P46963 CYC3YAL039C 810 nt8.23□□□□□ -1.09
CTK3P46963 AFG2YLR397C 2343 nt8.22□□□□□ -1.09
CTK3P46963 RUP1YOR138C 2016 nt8.21□□□□□ -1.1
CTK3P46963 YBL113CYBL113C 2379 nt8.2□□□□□ -1.1
CTK3P46963 YFR020WYFR020W 699 nt8.2□□□□□ -1.1
CTK3P46963 YMR007WYMR007W 381 nt8.2□□□□□ -1.1
CTK3P46963 WSC3YOL105C 1671 nt8.2□□□□□ -1.1
CTK3P46963 HTS1YPR033C 1641 nt8.19□□□□□ -1.1
CTK3P46963 BNA3YJL060W 1335 nt8.19□□□□□ -1.1
CTK3P46963 MAL31YBR298C 1845 nt8.19□□□□□ -1.1
CTK3P46963 MAS2YHR024C 1449 nt8.19□□□□□ -1.1
CTK3P46963 SNP1YIL061C 903 nt8.18□□□□□ -1.1
CTK3P46963 RCF1YML030W 480 nt8.18□□□□□ -1.1
CTK3P46963 YOR041CYOR041C 432 nt8.18□□□□□ -1.1
CTK3P46963 PRB1YEL060C 1908 nt8.17□□□□□ -1.1
CTK3P46963 RMD8YFR048W 1989 nt8.17□□□□□ -1.1
CTK3P46963 TES1YJR019C 1050 nt8.17□□□□□ -1.1
CTK3P46963 SRP102YKL154W 735 nt8.17□□□□□ -1.1
CTK3P46963 CDA1YLR307W 906 nt8.17□□□□□ -1.1
CTK3P46963 NDE1YMR145C 1683 nt8.16□□□□□ -1.1
CTK3P46963 MET22YOL064C 1074 nt8.16□□□□□ -1.1
CTK3P46963 SEC24YIL109C 2781 nt8.16□□□□□ -1.1
CTK3P46963 ENO1YGR254W 1314 nt8.15□□□□□ -1.1
Retrieved 100 of 7,029 protein–RNA pairs in 55.3 ms