Protein–RNA interactions for Protein: P04628

WNT1, Proto-oncogene Wnt-1, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT1P04628 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
WNT1P04628 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
WNT1P04628 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
WNT1P04628 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
WNT1P04628 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.51■■□□□ 1.67
WNT1P04628 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
WNT1P04628 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.5■■□□□ 1.67
WNT1P04628 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
WNT1P04628 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
WNT1P04628 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.49■■□□□ 1.67
WNT1P04628 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.49■■□□□ 1.67
WNT1P04628 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.49■■□□□ 1.67
WNT1P04628 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
WNT1P04628 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
WNT1P04628 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
WNT1P04628 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
WNT1P04628 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
WNT1P04628 RNF126P1-201ENST00000567452 1320 ntBASIC25.47■■□□□ 1.67
WNT1P04628 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
WNT1P04628 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
WNT1P04628 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
WNT1P04628 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.46■■□□□ 1.67
WNT1P04628 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
WNT1P04628 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
WNT1P04628 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
WNT1P04628 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
WNT1P04628 AC008813.1-201ENST00000536597 885 ntBASIC25.44■■□□□ 1.66
WNT1P04628 ABHD17AP5-201ENST00000580133 923 ntBASIC25.44■■□□□ 1.66
WNT1P04628 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.44■■□□□ 1.66
WNT1P04628 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
WNT1P04628 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
WNT1P04628 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
WNT1P04628 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.42■■□□□ 1.66
WNT1P04628 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.42■■□□□ 1.66
WNT1P04628 AC022413.1-201ENST00000624602 984 ntBASIC25.42■■□□□ 1.66
WNT1P04628 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
WNT1P04628 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
WNT1P04628 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
WNT1P04628 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
WNT1P04628 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.41■■□□□ 1.66
WNT1P04628 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.41■■□□□ 1.66
WNT1P04628 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.41■■□□□ 1.66
WNT1P04628 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
WNT1P04628 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
WNT1P04628 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
WNT1P04628 AC110285.7-201ENST00000624417 1536 ntBASIC25.4■■□□□ 1.66
WNT1P04628 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
WNT1P04628 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
WNT1P04628 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.66
WNT1P04628 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC25.39■■□□□ 1.65
WNT1P04628 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
WNT1P04628 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
WNT1P04628 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
WNT1P04628 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
WNT1P04628 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.38■■□□□ 1.65
WNT1P04628 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.38■■□□□ 1.65
WNT1P04628 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.37■■□□□ 1.65
WNT1P04628 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
WNT1P04628 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
WNT1P04628 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.37■■□□□ 1.65
WNT1P04628 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
WNT1P04628 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
WNT1P04628 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.34■■□□□ 1.65
WNT1P04628 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.34■■□□□ 1.65
WNT1P04628 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.34■■□□□ 1.65
WNT1P04628 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.34■■□□□ 1.65
WNT1P04628 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
WNT1P04628 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
WNT1P04628 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
WNT1P04628 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.33■■□□□ 1.65
WNT1P04628 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
WNT1P04628 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
WNT1P04628 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
WNT1P04628 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
WNT1P04628 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.32■■□□□ 1.64
WNT1P04628 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
WNT1P04628 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.31■■□□□ 1.64
WNT1P04628 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
WNT1P04628 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.31■■□□□ 1.64
WNT1P04628 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
WNT1P04628 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
WNT1P04628 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.3■■□□□ 1.64
WNT1P04628 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC25.3■■□□□ 1.64
WNT1P04628 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
WNT1P04628 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
WNT1P04628 AC148477.6-201ENST00000623746 465 ntBASIC25.29■■□□□ 1.64
WNT1P04628 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
WNT1P04628 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
WNT1P04628 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
WNT1P04628 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.28■■□□□ 1.64
WNT1P04628 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.26■■□□□ 1.63
WNT1P04628 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
WNT1P04628 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
WNT1P04628 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC25.25■■□□□ 1.63
WNT1P04628 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.25■■□□□ 1.63
WNT1P04628 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC25.25■■□□□ 1.63
WNT1P04628 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
WNT1P04628 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.24■■□□□ 1.63
WNT1P04628 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
WNT1P04628 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms