Protein–RNA interactions for Protein: P04435

TCRB, T-cell receptor beta chain V region CTL-L17, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBP04435 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
TCRBP04435 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TCRBP04435 AC091060.1-201ENST00000623524 1766 ntBASIC21.87■■□□□ 1.09
TCRBP04435 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TCRBP04435 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.86■■□□□ 1.09
TCRBP04435 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC21.86■■□□□ 1.09
TCRBP04435 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
TCRBP04435 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TCRBP04435 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TCRBP04435 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.86■■□□□ 1.09
TCRBP04435 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TCRBP04435 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
TCRBP04435 LINC01003-201ENST00000564834 1764 ntBASIC21.85■■□□□ 1.09
TCRBP04435 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.85■■□□□ 1.09
TCRBP04435 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TCRBP04435 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TCRBP04435 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TCRBP04435 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.84■■□□□ 1.09
TCRBP04435 AC020928.2-201ENST00000588717 2197 ntBASIC21.84■■□□□ 1.09
TCRBP04435 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TCRBP04435 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TCRBP04435 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
TCRBP04435 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TCRBP04435 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TCRBP04435 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.82■■□□□ 1.08
TCRBP04435 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.82■■□□□ 1.08
TCRBP04435 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC21.81■■□□□ 1.08
TCRBP04435 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.81■■□□□ 1.08
TCRBP04435 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.81■■□□□ 1.08
TCRBP04435 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TCRBP04435 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TCRBP04435 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TCRBP04435 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
TCRBP04435 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TCRBP04435 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TCRBP04435 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TCRBP04435 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.8■■□□□ 1.08
TCRBP04435 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TCRBP04435 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.79■■□□□ 1.08
TCRBP04435 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TCRBP04435 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TCRBP04435 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TCRBP04435 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TCRBP04435 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.78■■□□□ 1.08
TCRBP04435 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
TCRBP04435 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TCRBP04435 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
TCRBP04435 AC093323.1-202ENST00000635031 2045 ntBASIC21.77■■□□□ 1.07
TCRBP04435 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
TCRBP04435 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TCRBP04435 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TCRBP04435 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TCRBP04435 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TCRBP04435 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
TCRBP04435 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TCRBP04435 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TCRBP04435 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TCRBP04435 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TCRBP04435 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.73■■□□□ 1.07
TCRBP04435 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.73■■□□□ 1.07
TCRBP04435 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TCRBP04435 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TCRBP04435 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TCRBP04435 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.72■■□□□ 1.07
TCRBP04435 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TCRBP04435 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TCRBP04435 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TCRBP04435 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TCRBP04435 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.71■■□□□ 1.07
TCRBP04435 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TCRBP04435 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TCRBP04435 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.7■■□□□ 1.06
TCRBP04435 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TCRBP04435 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TCRBP04435 AC145676.1-201ENST00000514988 2004 ntBASIC21.69■■□□□ 1.06
TCRBP04435 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TCRBP04435 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TCRBP04435 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TCRBP04435 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.68■■□□□ 1.06
TCRBP04435 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TCRBP04435 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TCRBP04435 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TCRBP04435 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TCRBP04435 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
TCRBP04435 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TCRBP04435 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
TCRBP04435 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
TCRBP04435 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TCRBP04435 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TCRBP04435 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TCRBP04435 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TCRBP04435 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TCRBP04435 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
TCRBP04435 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.66■■□□□ 1.06
TCRBP04435 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
TCRBP04435 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
TCRBP04435 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TCRBP04435 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.66■■□□□ 1.06
TCRBP04435 AC010864.1-201ENST00000609407 1511 ntBASIC21.65■■□□□ 1.06
TCRBP04435 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms