Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.16■■□□□ 1.3
PFDN1O60925 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
PFDN1O60925 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.16■■□□□ 1.3
PFDN1O60925 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
PFDN1O60925 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
PFDN1O60925 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PFDN1O60925 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PFDN1O60925 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PFDN1O60925 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
PFDN1O60925 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
PFDN1O60925 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PFDN1O60925 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PFDN1O60925 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PFDN1O60925 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PFDN1O60925 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.13■■□□□ 1.29
PFDN1O60925 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PFDN1O60925 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
PFDN1O60925 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
PFDN1O60925 AC020928.2-201ENST00000588717 2197 ntBASIC23.12■■□□□ 1.29
PFDN1O60925 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PFDN1O60925 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.11■■□□□ 1.29
PFDN1O60925 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PFDN1O60925 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
PFDN1O60925 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.1■■□□□ 1.29
PFDN1O60925 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.1■■□□□ 1.29
PFDN1O60925 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PFDN1O60925 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PFDN1O60925 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
PFDN1O60925 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PFDN1O60925 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PFDN1O60925 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
PFDN1O60925 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
PFDN1O60925 AC133561.1-201ENST00000568600 2415 ntBASIC23.08■■□□□ 1.28
PFDN1O60925 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
PFDN1O60925 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
PFDN1O60925 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PFDN1O60925 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PFDN1O60925 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PFDN1O60925 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PFDN1O60925 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
PFDN1O60925 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PFDN1O60925 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PFDN1O60925 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.06■■□□□ 1.28
PFDN1O60925 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PFDN1O60925 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
PFDN1O60925 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PFDN1O60925 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PFDN1O60925 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
PFDN1O60925 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
PFDN1O60925 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PFDN1O60925 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PFDN1O60925 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PFDN1O60925 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PFDN1O60925 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PFDN1O60925 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.03■■□□□ 1.28
PFDN1O60925 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PFDN1O60925 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PFDN1O60925 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PFDN1O60925 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.03■■□□□ 1.28
PFDN1O60925 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PFDN1O60925 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.02■■□□□ 1.28
PFDN1O60925 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
PFDN1O60925 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
PFDN1O60925 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PFDN1O60925 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PFDN1O60925 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC23.01■■□□□ 1.27
PFDN1O60925 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PFDN1O60925 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
PFDN1O60925 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.01■■□□□ 1.27
PFDN1O60925 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
PFDN1O60925 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
PFDN1O60925 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PFDN1O60925 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.99■■□□□ 1.27
PFDN1O60925 LINC00543-201ENST00000567234 1845 ntBASIC22.98■■□□□ 1.27
PFDN1O60925 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
PFDN1O60925 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.98■■□□□ 1.27
PFDN1O60925 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PFDN1O60925 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.98■■□□□ 1.27
PFDN1O60925 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PFDN1O60925 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PFDN1O60925 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
PFDN1O60925 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC22.97■■□□□ 1.27
PFDN1O60925 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.97■■□□□ 1.27
PFDN1O60925 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PFDN1O60925 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC22.96■■□□□ 1.27
PFDN1O60925 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PFDN1O60925 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
PFDN1O60925 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
PFDN1O60925 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PFDN1O60925 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
PFDN1O60925 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.94■■□□□ 1.26
PFDN1O60925 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PFDN1O60925 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PFDN1O60925 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.94■■□□□ 1.26
PFDN1O60925 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.94■■□□□ 1.26
PFDN1O60925 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
PFDN1O60925 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
PFDN1O60925 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.93■■□□□ 1.26
PFDN1O60925 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PFDN1O60925 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms