Protein–RNA interactions for Protein: O60293

ZFC3H1, Zinc finger C3H1 domain-containing protein, humanhuman

Known RBP Predictions only

Length 1,989 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFC3H1O60293 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
ZFC3H1O60293 LINC01971-201ENST00000617888 1048 ntBASIC25.49■■□□□ 1.67
ZFC3H1O60293 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
ZFC3H1O60293 AC016575.1-201ENST00000607026 382 ntBASIC25.49■■□□□ 1.67
ZFC3H1O60293 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.48■■□□□ 1.67
ZFC3H1O60293 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.47■■□□□ 1.67
ZFC3H1O60293 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.47■■□□□ 1.67
ZFC3H1O60293 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ZFC3H1O60293 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ZFC3H1O60293 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.47■■□□□ 1.67
ZFC3H1O60293 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.45■■□□□ 1.67
ZFC3H1O60293 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.45■■□□□ 1.66
ZFC3H1O60293 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.45■■□□□ 1.66
ZFC3H1O60293 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
ZFC3H1O60293 DUX4L11-201ENST00000611504 1267 ntBASIC25.44■■□□□ 1.66
ZFC3H1O60293 DUX4L12-201ENST00000614593 1267 ntBASIC25.44■■□□□ 1.66
ZFC3H1O60293 DUX4L14-201ENST00000621227 1267 ntBASIC25.44■■□□□ 1.66
ZFC3H1O60293 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
ZFC3H1O60293 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
ZFC3H1O60293 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
ZFC3H1O60293 AC135983.2-203ENST00000454486 1613 ntBASIC25.43■■□□□ 1.66
ZFC3H1O60293 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
ZFC3H1O60293 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.43■■□□□ 1.66
ZFC3H1O60293 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
ZFC3H1O60293 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
ZFC3H1O60293 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
ZFC3H1O60293 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
ZFC3H1O60293 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.42■■□□□ 1.66
ZFC3H1O60293 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.42■■□□□ 1.66
ZFC3H1O60293 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.42■■□□□ 1.66
ZFC3H1O60293 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
ZFC3H1O60293 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
ZFC3H1O60293 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ZFC3H1O60293 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
ZFC3H1O60293 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
ZFC3H1O60293 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.39■■□□□ 1.66
ZFC3H1O60293 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
ZFC3H1O60293 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
ZFC3H1O60293 DUX4L13-201ENST00000554103 1267 ntBASIC25.38■■□□□ 1.65
ZFC3H1O60293 DUX4L15-201ENST00000611059 1267 ntBASIC25.38■■□□□ 1.65
ZFC3H1O60293 DUX4L23-201ENST00000615195 1269 ntBASIC25.38■■□□□ 1.65
ZFC3H1O60293 DUX4L24-201ENST00000617576 1269 ntBASIC25.38■■□□□ 1.65
ZFC3H1O60293 DUX4L22-201ENST00000618238 1269 ntBASIC25.38■■□□□ 1.65
ZFC3H1O60293 DUX4L20-201ENST00000619712 1269 ntBASIC25.38■■□□□ 1.65
ZFC3H1O60293 DUX4L21-201ENST00000622058 1269 ntBASIC25.38■■□□□ 1.65
ZFC3H1O60293 DUX4L10-201ENST00000622460 1267 ntBASIC25.38■■□□□ 1.65
ZFC3H1O60293 DUX4L25-201ENST00000624915 1269 ntBASIC25.38■■□□□ 1.65
ZFC3H1O60293 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
ZFC3H1O60293 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
ZFC3H1O60293 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.38■■□□□ 1.65
ZFC3H1O60293 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
ZFC3H1O60293 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ZFC3H1O60293 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
ZFC3H1O60293 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.37■■□□□ 1.65
ZFC3H1O60293 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.36■■□□□ 1.65
ZFC3H1O60293 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
ZFC3H1O60293 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
ZFC3H1O60293 WHAMMP2-203ENST00000563942 1603 ntBASIC25.35■■□□□ 1.65
ZFC3H1O60293 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.35■■□□□ 1.65
ZFC3H1O60293 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
ZFC3H1O60293 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
ZFC3H1O60293 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.33■■□□□ 1.65
ZFC3H1O60293 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.33■■□□□ 1.65
ZFC3H1O60293 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
ZFC3H1O60293 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
ZFC3H1O60293 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
ZFC3H1O60293 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.32■■□□□ 1.64
ZFC3H1O60293 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
ZFC3H1O60293 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
ZFC3H1O60293 MIR4449-201ENST00000578365 66 ntBASIC25.31■■□□□ 1.64
ZFC3H1O60293 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
ZFC3H1O60293 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
ZFC3H1O60293 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
ZFC3H1O60293 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
ZFC3H1O60293 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.3■■□□□ 1.64
ZFC3H1O60293 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ZFC3H1O60293 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.29■■□□□ 1.64
ZFC3H1O60293 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
ZFC3H1O60293 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ZFC3H1O60293 AC127502.1-201ENST00000399971 1502 ntBASIC25.29■■□□□ 1.64
ZFC3H1O60293 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ZFC3H1O60293 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.28■■□□□ 1.64
ZFC3H1O60293 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.28■■□□□ 1.64
ZFC3H1O60293 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.28■■□□□ 1.64
ZFC3H1O60293 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
ZFC3H1O60293 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ZFC3H1O60293 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ZFC3H1O60293 AL139393.2-201ENST00000608721 2025 ntBASIC25.27■■□□□ 1.64
ZFC3H1O60293 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
ZFC3H1O60293 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ZFC3H1O60293 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.26■■□□□ 1.63
ZFC3H1O60293 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
ZFC3H1O60293 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ZFC3H1O60293 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ZFC3H1O60293 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.25■■□□□ 1.63
ZFC3H1O60293 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ZFC3H1O60293 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ZFC3H1O60293 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.24■■□□□ 1.63
ZFC3H1O60293 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.24■■□□□ 1.63
ZFC3H1O60293 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms