Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SSSCA1O60232 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.8■□□□□ 0.92
SSSCA1O60232 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SSSCA1O60232 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.8■□□□□ 0.92
SSSCA1O60232 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SSSCA1O60232 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SSSCA1O60232 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SSSCA1O60232 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.79■□□□□ 0.92
SSSCA1O60232 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SSSCA1O60232 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SSSCA1O60232 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SSSCA1O60232 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SSSCA1O60232 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SSSCA1O60232 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SSSCA1O60232 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSSCA1O60232 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SSSCA1O60232 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.78■□□□□ 0.92
SSSCA1O60232 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.78■□□□□ 0.92
SSSCA1O60232 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.77■□□□□ 0.92
SSSCA1O60232 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.77■□□□□ 0.92
SSSCA1O60232 LINC01003-201ENST00000564834 1764 ntBASIC20.77■□□□□ 0.92
SSSCA1O60232 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSSCA1O60232 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSSCA1O60232 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.77■□□□□ 0.92
SSSCA1O60232 AL449106.1-201ENST00000608517 1980 ntBASIC20.77■□□□□ 0.92
SSSCA1O60232 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSSCA1O60232 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.77■□□□□ 0.91
SSSCA1O60232 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSSCA1O60232 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.76■□□□□ 0.91
SSSCA1O60232 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.75■□□□□ 0.91
SSSCA1O60232 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSSCA1O60232 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSSCA1O60232 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.75■□□□□ 0.91
SSSCA1O60232 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.75■□□□□ 0.91
SSSCA1O60232 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSSCA1O60232 AP004833.2-201ENST00000532228 1454 ntBASIC20.75■□□□□ 0.91
SSSCA1O60232 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SSSCA1O60232 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SSSCA1O60232 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSSCA1O60232 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSSCA1O60232 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.73■□□□□ 0.91
SSSCA1O60232 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
SSSCA1O60232 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSSCA1O60232 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SSSCA1O60232 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSSCA1O60232 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSSCA1O60232 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSSCA1O60232 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
SSSCA1O60232 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSSCA1O60232 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSSCA1O60232 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
SSSCA1O60232 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSSCA1O60232 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SSSCA1O60232 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSSCA1O60232 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSSCA1O60232 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSSCA1O60232 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSSCA1O60232 AP002365.1-201ENST00000603448 772 ntBASIC20.69■□□□□ 0.9
SSSCA1O60232 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSSCA1O60232 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SSSCA1O60232 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SSSCA1O60232 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSSCA1O60232 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSSCA1O60232 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSSCA1O60232 AL133380.1-201ENST00000506013 324 ntBASIC20.68■□□□□ 0.9
SSSCA1O60232 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
SSSCA1O60232 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SSSCA1O60232 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.67■□□□□ 0.9
SSSCA1O60232 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SSSCA1O60232 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSSCA1O60232 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.66■□□□□ 0.9
SSSCA1O60232 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSSCA1O60232 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSSCA1O60232 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SSSCA1O60232 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSSCA1O60232 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.65■□□□□ 0.9
SSSCA1O60232 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.65■□□□□ 0.9
SSSCA1O60232 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SSSCA1O60232 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
SSSCA1O60232 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SSSCA1O60232 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SSSCA1O60232 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.64■□□□□ 0.89
SSSCA1O60232 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSSCA1O60232 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSSCA1O60232 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.62■□□□□ 0.89
SSSCA1O60232 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSSCA1O60232 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSSCA1O60232 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSSCA1O60232 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SSSCA1O60232 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSSCA1O60232 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSSCA1O60232 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSSCA1O60232 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SSSCA1O60232 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.61■□□□□ 0.89
SSSCA1O60232 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSSCA1O60232 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSSCA1O60232 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSSCA1O60232 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSSCA1O60232 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.61■□□□□ 0.89
SSSCA1O60232 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms