Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
SOX1O00570 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SOX1O00570 DUX4L18-201ENST00000553347 1267 ntBASIC28.27■■■□□ 2.12
SOX1O00570 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC28.27■■■□□ 2.12
SOX1O00570 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC28.26■■■□□ 2.11
SOX1O00570 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SOX1O00570 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
SOX1O00570 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC28.25■■■□□ 2.11
SOX1O00570 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
SOX1O00570 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SOX1O00570 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SOX1O00570 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
SOX1O00570 LINC00273-201ENST00000539813 1452 ntBASIC28.23■■■□□ 2.11
SOX1O00570 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC28.22■■■□□ 2.11
SOX1O00570 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC28.21■■■□□ 2.11
SOX1O00570 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC28.21■■■□□ 2.11
SOX1O00570 AC129492.7-201ENST00000622992 756 ntBASIC28.21■■■□□ 2.11
SOX1O00570 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.1
SOX1O00570 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
SOX1O00570 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SOX1O00570 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
SOX1O00570 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC28.18■■■□□ 2.1
SOX1O00570 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
SOX1O00570 CHST11-203ENST00000547956 936 ntTSL 2 BASIC28.18■■■□□ 2.1
SOX1O00570 AC092296.2-201ENST00000589470 999 ntBASIC28.18■■■□□ 2.1
SOX1O00570 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
SOX1O00570 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
SOX1O00570 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC28.17■■■□□ 2.1
SOX1O00570 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
SOX1O00570 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC28.16■■■□□ 2.1
SOX1O00570 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
SOX1O00570 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SOX1O00570 AC009299.2-201ENST00000482477 511 ntBASIC28.15■■■□□ 2.1
SOX1O00570 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
SOX1O00570 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
SOX1O00570 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC28.14■■■□□ 2.1
SOX1O00570 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
SOX1O00570 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC28.13■■■□□ 2.09
SOX1O00570 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC28.12■■■□□ 2.09
SOX1O00570 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
SOX1O00570 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
SOX1O00570 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC28.11■■■□□ 2.09
SOX1O00570 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
SOX1O00570 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC28.1■■■□□ 2.09
SOX1O00570 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
SOX1O00570 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC28.1■■■□□ 2.09
SOX1O00570 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
SOX1O00570 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
SOX1O00570 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC28.09■■■□□ 2.09
SOX1O00570 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
SOX1O00570 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
SOX1O00570 HES6-204ENST00000409182 863 ntTSL 2 BASIC28.09■■■□□ 2.09
SOX1O00570 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC28.09■■■□□ 2.09
SOX1O00570 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
SOX1O00570 GUSBP5-201ENST00000418136 578 ntBASIC28.08■■■□□ 2.09
SOX1O00570 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.08
SOX1O00570 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC28.06■■■□□ 2.08
SOX1O00570 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC28.06■■■□□ 2.08
SOX1O00570 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
SOX1O00570 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
SOX1O00570 ECEL1P2-201ENST00000461596 1295 ntBASIC28.05■■■□□ 2.08
SOX1O00570 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC28.05■■■□□ 2.08
SOX1O00570 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
SOX1O00570 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
SOX1O00570 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC28.03■■■□□ 2.08
SOX1O00570 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC28.03■■■□□ 2.08
SOX1O00570 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
SOX1O00570 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
SOX1O00570 KRT8P33-201ENST00000508125 1423 ntBASIC28.02■■■□□ 2.08
SOX1O00570 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC28.02■■■□□ 2.08
SOX1O00570 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC28.02■■■□□ 2.08
SOX1O00570 AC025884.2-201ENST00000553429 711 ntBASIC28.02■■■□□ 2.08
SOX1O00570 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
SOX1O00570 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC28.01■■■□□ 2.07
SOX1O00570 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
SOX1O00570 AL592293.1-201ENST00000502889 1188 ntBASIC28.01■■■□□ 2.07
SOX1O00570 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC28.01■■■□□ 2.07
SOX1O00570 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC28■■■□□ 2.07
SOX1O00570 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC28■■■□□ 2.07
SOX1O00570 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC27.99■■■□□ 2.07
SOX1O00570 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
SOX1O00570 OR2A1-AS1-204ENST00000470435 602 ntBASIC27.99■■■□□ 2.07
SOX1O00570 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC27.99■■■□□ 2.07
SOX1O00570 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC27.98■■■□□ 2.07
SOX1O00570 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
SOX1O00570 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC27.96■■■□□ 2.07
SOX1O00570 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
SOX1O00570 RP9P-202ENST00000450133 1212 ntBASIC27.96■■■□□ 2.07
SOX1O00570 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC27.96■■■□□ 2.07
SOX1O00570 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC27.96■■■□□ 2.07
SOX1O00570 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC27.95■■■□□ 2.06
SOX1O00570 AC148477.6-201ENST00000623746 465 ntBASIC27.95■■■□□ 2.06
SOX1O00570 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.95■■■□□ 2.06
SOX1O00570 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC27.95■■■□□ 2.06
SOX1O00570 AC010980.1-201ENST00000587192 1142 ntBASIC27.94■■■□□ 2.06
SOX1O00570 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC27.94■■■□□ 2.06
SOX1O00570 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
SOX1O00570 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
SOX1O00570 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
SOX1O00570 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms