Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
MEIS3P1A6NDR6 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
MEIS3P1A6NDR6 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.86■■□□□ 1.09
MEIS3P1A6NDR6 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
MEIS3P1A6NDR6 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MEIS3P1A6NDR6 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
MEIS3P1A6NDR6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MEIS3P1A6NDR6 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
MEIS3P1A6NDR6 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
MEIS3P1A6NDR6 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
MEIS3P1A6NDR6 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.83■■□□□ 1.09
MEIS3P1A6NDR6 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.83■■□□□ 1.09
MEIS3P1A6NDR6 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.83■■□□□ 1.09
MEIS3P1A6NDR6 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.83■■□□□ 1.08
MEIS3P1A6NDR6 AL449106.1-201ENST00000608517 1980 ntBASIC21.83■■□□□ 1.08
MEIS3P1A6NDR6 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.82■■□□□ 1.08
MEIS3P1A6NDR6 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
MEIS3P1A6NDR6 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
MEIS3P1A6NDR6 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.82■■□□□ 1.08
MEIS3P1A6NDR6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MEIS3P1A6NDR6 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MEIS3P1A6NDR6 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.81■■□□□ 1.08
MEIS3P1A6NDR6 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
MEIS3P1A6NDR6 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MEIS3P1A6NDR6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
MEIS3P1A6NDR6 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
MEIS3P1A6NDR6 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
MEIS3P1A6NDR6 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MEIS3P1A6NDR6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MEIS3P1A6NDR6 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.8■■□□□ 1.08
MEIS3P1A6NDR6 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MEIS3P1A6NDR6 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.8■■□□□ 1.08
MEIS3P1A6NDR6 AL133380.1-201ENST00000506013 324 ntBASIC21.8■■□□□ 1.08
MEIS3P1A6NDR6 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MEIS3P1A6NDR6 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.8■■□□□ 1.08
MEIS3P1A6NDR6 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.8■■□□□ 1.08
MEIS3P1A6NDR6 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
MEIS3P1A6NDR6 LINC01003-201ENST00000564834 1764 ntBASIC21.79■■□□□ 1.08
MEIS3P1A6NDR6 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.79■■□□□ 1.08
MEIS3P1A6NDR6 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MEIS3P1A6NDR6 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MEIS3P1A6NDR6 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
MEIS3P1A6NDR6 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
MEIS3P1A6NDR6 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
MEIS3P1A6NDR6 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.78■■□□□ 1.08
MEIS3P1A6NDR6 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.78■■□□□ 1.08
MEIS3P1A6NDR6 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MEIS3P1A6NDR6 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
MEIS3P1A6NDR6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.77■■□□□ 1.08
MEIS3P1A6NDR6 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MEIS3P1A6NDR6 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MEIS3P1A6NDR6 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MEIS3P1A6NDR6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
MEIS3P1A6NDR6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.75■■□□□ 1.07
MEIS3P1A6NDR6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MEIS3P1A6NDR6 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MEIS3P1A6NDR6 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
MEIS3P1A6NDR6 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
MEIS3P1A6NDR6 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
MEIS3P1A6NDR6 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.74■■□□□ 1.07
MEIS3P1A6NDR6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
MEIS3P1A6NDR6 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
MEIS3P1A6NDR6 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MEIS3P1A6NDR6 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
MEIS3P1A6NDR6 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
MEIS3P1A6NDR6 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MEIS3P1A6NDR6 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MEIS3P1A6NDR6 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
MEIS3P1A6NDR6 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
MEIS3P1A6NDR6 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
MEIS3P1A6NDR6 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.72■■□□□ 1.07
MEIS3P1A6NDR6 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MEIS3P1A6NDR6 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
MEIS3P1A6NDR6 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MEIS3P1A6NDR6 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MEIS3P1A6NDR6 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.72■■□□□ 1.07
MEIS3P1A6NDR6 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MEIS3P1A6NDR6 AP004833.2-201ENST00000532228 1454 ntBASIC21.71■■□□□ 1.07
MEIS3P1A6NDR6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
MEIS3P1A6NDR6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MEIS3P1A6NDR6 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.71■■□□□ 1.07
MEIS3P1A6NDR6 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MEIS3P1A6NDR6 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MEIS3P1A6NDR6 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
MEIS3P1A6NDR6 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.69■■□□□ 1.06
MEIS3P1A6NDR6 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC21.69■■□□□ 1.06
MEIS3P1A6NDR6 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
MEIS3P1A6NDR6 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MEIS3P1A6NDR6 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MEIS3P1A6NDR6 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
MEIS3P1A6NDR6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MEIS3P1A6NDR6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
MEIS3P1A6NDR6 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MEIS3P1A6NDR6 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MEIS3P1A6NDR6 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MEIS3P1A6NDR6 AC127502.1-201ENST00000399971 1502 ntBASIC21.65■■□□□ 1.06
MEIS3P1A6NDR6 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.65■■□□□ 1.06
MEIS3P1A6NDR6 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.65■■□□□ 1.06
MEIS3P1A6NDR6 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MEIS3P1A6NDR6 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms