Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.14■■□□□ 1.46
TCRBV3S1A0A5B6 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.14■■□□□ 1.45
TCRBV3S1A0A5B6 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
TCRBV3S1A0A5B6 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TCRBV3S1A0A5B6 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
TCRBV3S1A0A5B6 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.13■■□□□ 1.45
TCRBV3S1A0A5B6 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC24.12■■□□□ 1.45
TCRBV3S1A0A5B6 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TCRBV3S1A0A5B6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.12■■□□□ 1.45
TCRBV3S1A0A5B6 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TCRBV3S1A0A5B6 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TCRBV3S1A0A5B6 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TCRBV3S1A0A5B6 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TCRBV3S1A0A5B6 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC24.1■■□□□ 1.45
TCRBV3S1A0A5B6 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.09■■□□□ 1.45
TCRBV3S1A0A5B6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TCRBV3S1A0A5B6 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TCRBV3S1A0A5B6 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
TCRBV3S1A0A5B6 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.44
TCRBV3S1A0A5B6 AC091060.1-201ENST00000623524 1766 ntBASIC24.07■■□□□ 1.44
TCRBV3S1A0A5B6 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
TCRBV3S1A0A5B6 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
TCRBV3S1A0A5B6 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.07■■□□□ 1.44
TCRBV3S1A0A5B6 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TCRBV3S1A0A5B6 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TCRBV3S1A0A5B6 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TCRBV3S1A0A5B6 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TCRBV3S1A0A5B6 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TCRBV3S1A0A5B6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
TCRBV3S1A0A5B6 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.05■■□□□ 1.44
TCRBV3S1A0A5B6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.05■■□□□ 1.44
TCRBV3S1A0A5B6 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
TCRBV3S1A0A5B6 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TCRBV3S1A0A5B6 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TCRBV3S1A0A5B6 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
TCRBV3S1A0A5B6 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
TCRBV3S1A0A5B6 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
TCRBV3S1A0A5B6 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TCRBV3S1A0A5B6 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.03■■□□□ 1.44
TCRBV3S1A0A5B6 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TCRBV3S1A0A5B6 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC24.03■■□□□ 1.44
TCRBV3S1A0A5B6 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TCRBV3S1A0A5B6 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
TCRBV3S1A0A5B6 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
TCRBV3S1A0A5B6 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
TCRBV3S1A0A5B6 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
TCRBV3S1A0A5B6 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC24.02■■□□□ 1.44
TCRBV3S1A0A5B6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TCRBV3S1A0A5B6 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.02■■□□□ 1.43
TCRBV3S1A0A5B6 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.01■■□□□ 1.43
TCRBV3S1A0A5B6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TCRBV3S1A0A5B6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.01■■□□□ 1.43
TCRBV3S1A0A5B6 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TCRBV3S1A0A5B6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
TCRBV3S1A0A5B6 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
TCRBV3S1A0A5B6 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24■■□□□ 1.43
TCRBV3S1A0A5B6 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
TCRBV3S1A0A5B6 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TCRBV3S1A0A5B6 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24■■□□□ 1.43
TCRBV3S1A0A5B6 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TCRBV3S1A0A5B6 AL133380.1-201ENST00000506013 324 ntBASIC23.99■■□□□ 1.43
TCRBV3S1A0A5B6 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
TCRBV3S1A0A5B6 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.98■■□□□ 1.43
TCRBV3S1A0A5B6 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TCRBV3S1A0A5B6 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TCRBV3S1A0A5B6 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TCRBV3S1A0A5B6 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
TCRBV3S1A0A5B6 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
TCRBV3S1A0A5B6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
TCRBV3S1A0A5B6 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC23.95■■□□□ 1.42
TCRBV3S1A0A5B6 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
TCRBV3S1A0A5B6 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.94■■□□□ 1.42
TCRBV3S1A0A5B6 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.94■■□□□ 1.42
TCRBV3S1A0A5B6 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TCRBV3S1A0A5B6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.94■■□□□ 1.42
TCRBV3S1A0A5B6 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TCRBV3S1A0A5B6 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TCRBV3S1A0A5B6 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TCRBV3S1A0A5B6 AC127502.1-201ENST00000399971 1502 ntBASIC23.93■■□□□ 1.42
TCRBV3S1A0A5B6 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
TCRBV3S1A0A5B6 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
TCRBV3S1A0A5B6 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
TCRBV3S1A0A5B6 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TCRBV3S1A0A5B6 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TCRBV3S1A0A5B6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TCRBV3S1A0A5B6 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TCRBV3S1A0A5B6 AC100797.4-201ENST00000631653 1827 ntBASIC23.91■■□□□ 1.42
TCRBV3S1A0A5B6 AC020928.2-201ENST00000588717 2197 ntBASIC23.91■■□□□ 1.42
TCRBV3S1A0A5B6 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TCRBV3S1A0A5B6 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
TCRBV3S1A0A5B6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.9■■□□□ 1.42
TCRBV3S1A0A5B6 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
TCRBV3S1A0A5B6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
TCRBV3S1A0A5B6 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
TCRBV3S1A0A5B6 AC145676.1-201ENST00000514988 2004 ntBASIC23.88■■□□□ 1.41
TCRBV3S1A0A5B6 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
TCRBV3S1A0A5B6 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TCRBV3S1A0A5B6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TCRBV3S1A0A5B6 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TCRBV3S1A0A5B6 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms