Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 SIM1-201ENST00000262901 3999 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 BARD1-213ENST00000619009 3967 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 KIF2C-202ENST00000372224 2879 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 AC027045.3-201ENST00000635215 2884 ntTSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 ZNF133-214ENST00000628216 2318 ntAPPRIS ALT2 TSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 USP6-205ENST00000574788 8464 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 IFT122-202ENST00000347300 3841 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 ATP7B-204ENST00000400370 3252 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 SF3B2-206ENST00000528302 3254 ntTSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 SEC24A-202ENST00000398844 6299 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 TFCP2L1-201ENST00000263707 9292 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 UBQLN2-201ENST00000338222 4230 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 TLR12P-201ENST00000413515 2706 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 MAP3K13-210ENST00000446828 2737 ntTSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 SESTD1-203ENST00000428443 10615 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 PDCD4-202ENST00000393104 3697 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 AC022034.1-201ENST00000512867 2156 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 FUT6-202ENST00000318336 3137 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 RPGR-201ENST00000318842 3108 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 PAMR1-207ENST00000619888 3142 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 PEG10-206ENST00000612941 6392 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 PEG10-209ENST00000617526 6392 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 SH3GL2-201ENST00000380607 2565 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 LINC01141-203ENST00000426428 2993 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 PTGES3L-AARSD1-203ENST00000409399 2042 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 ZNF619-210ENST00000522736 2030 ntTSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 DDX11-229ENST00000545668 3751 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 SLC33A1-201ENST00000359479 2404 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 PTAFR-203ENST00000539896 4191 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 COA7-201ENST00000371538 4005 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 AL513122.1-201ENST00000455437 1463 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 NLRP1-210ENST00000572272 4422 ntAPPRIS P4 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 CORO2A-201ENST00000343933 5635 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 BABAM2-202ENST00000344773 1852 ntTSL 2 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 HPSE2-203ENST00000370552 2295 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 SMPD4P1-201ENST00000416717 2263 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 CASP7-207ENST00000452490 2271 ntTSL 2 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 C1orf94-202ENST00000488417 2287 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 SPDL1-201ENST00000265295 2668 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 ZNF835-201ENST00000537055 3450 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 MED24-202ENST00000394126 3896 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 AC012651.1-204ENST00000495723 3881 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 AP1B1-203ENST00000402502 2935 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 LINC00877-203ENST00000468646 2506 ntTSL 2 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 AL121768.1-201ENST00000613917 2544 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 AC109779.1-203ENST00000411727 2100 ntTSL 2 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 SERPINA9-203ENST00000380365 1333 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 DLG1-208ENST00000419354 3994 ntAPPRIS ALT1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 DCTN2-202ENST00000543672 1321 ntAPPRIS ALT1 TSL 5 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 RFX2-202ENST00000359161 3595 ntAPPRIS P4 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 ALDH1L1-201ENST00000273450 3179 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 CEP57-202ENST00000325542 3178 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 SLA2-201ENST00000262866 2757 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 CD300LG-202ENST00000317310 2758 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 ACTBL2-201ENST00000423391 2794 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 TP53TG5-201ENST00000372726 2374 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 AC022915.2-201ENST00000522575 2372 ntTSL 2 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 ASTN2-204ENST00000358637 3411 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 SEZ6L2-204ENST00000537485 3423 ntAPPRIS ALT2 TSL 2 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 IK-201ENST00000417647 1962 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 EGF-206ENST00000509793 4489 ntTSL 2 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 MECP2-201ENST00000303391 10505 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 CD22-204ENST00000536635 3004 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 LMOD3-202ENST00000475434 2238 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 AC048380.2-201ENST00000624725 3548 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 CAMK2G-201ENST00000305762 1820 ntTSL 5 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 POM121L6P-201ENST00000441186 1826 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 FGFR2-202ENST00000346997 2472 ntAPPRIS ALT1 TSL 5 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 FGFR2-203ENST00000351936 2478 ntTSL 5 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 TTC23-204ENST00000394135 2496 ntAPPRIS P2 TSL 5 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 ARHGEF26-205ENST00000496710 3781 ntTSL 2 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 UGT1A1-202ENST00000360418 3389 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 BNC2-202ENST00000380667 3361 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 RAD9B-205ENST00000409425 2727 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 KLHL10-201ENST00000293303 2057 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 LINC01260-201ENST00000415889 1416 ntTSL 5 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 THNSL2-201ENST00000324166 3649 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 RASSF4-201ENST00000340258 3641 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms