RNA–Protein interactions for RNA: ENST00000398844.6

SEC24A-202, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SEC24A, Length 6,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-202ENST00000398844 NISCHQ9Y2I1 1504 aa16.91■□□□□ 0.3
SEC24A-202ENST00000398844 DCAF8L2P0C7V8 631 aa16.25■□□□□ 0.19
SEC24A-202ENST00000398844 SHROOM4Q9ULL8 1493 aa15.92■□□□□ 0.14
SEC24A-202ENST00000398844 SUPT5HO00267 1087 aaKnown RBP15.75■□□□□ 0.11
SEC24A-202ENST00000398844 EHMT2Q96KQ7 1210 aa15.25■□□□□ 0.03
SEC24A-202ENST00000398844 FAM9AQ8IZU1 332 aaPredicted RBP14.81□□□□□ -0.04
SEC24A-202ENST00000398844 PCGF6Q9BYE7 350 aa14.69□□□□□ -0.06
SEC24A-202ENST00000398844 TTBK1Q5TCY1 1321 aaPredicted RBP14.68□□□□□ -0.06
SEC24A-202ENST00000398844 TRIM41Q8WV44 630 aa14.45□□□□□ -0.1
SEC24A-202ENST00000398844 RANGAP1P46060 587 aaPredicted RBP14.43□□□□□ -0.1
SEC24A-202ENST00000398844 PPARGC1BQ86YN6 1023 aaKnown RBP14.43□□□□□ -0.1
SEC24A-202ENST00000398844 LOC105371045A0A1W2PR82 267 aa14.41□□□□□ -0.1
SEC24A-202ENST00000398844 CHIC1Q5VXU3 224 aa14.34□□□□□ -0.11
SEC24A-202ENST00000398844 ABCC9O60706 1549 aa14.26□□□□□ -0.13
SEC24A-202ENST00000398844 ZCCHC6Q5VYS8 1495 aaKnown RBP14.12□□□□□ -0.15
SEC24A-202ENST00000398844 UBTFP17480 764 aaKnown RBP14.1□□□□□ -0.15
SEC24A-202ENST00000398844 SCRIBQ14160 1630 aa14.09□□□□□ -0.15
SEC24A-202ENST00000398844 APLP2Q06481 763 aa14.09□□□□□ -0.15
SEC24A-202ENST00000398844 CCER1Q8TC90 406 aaPredicted RBP14.06□□□□□ -0.16
SEC24A-202ENST00000398844 CCDC180Q9P1Z9 1646 aa14.04□□□□□ -0.16
SEC24A-202ENST00000398844 PABPN1Q86U42 306 aaKnown RBP eCLIP14.04□□□□□ -0.16
SEC24A-202ENST00000398844 HRCP23327 699 aa14.03□□□□□ -0.16
SEC24A-202ENST00000398844 TRIM26Q12899 539 aaPredicted RBP14□□□□□ -0.17
SEC24A-202ENST00000398844 ATP1B4Q9UN42 357 aaPredicted RBP13.98□□□□□ -0.17
SEC24A-202ENST00000398844 MYO15BQ96JP2 1530 aa13.94□□□□□ -0.18
SEC24A-202ENST00000398844 YTHDC1Q96MU7 727 aaKnown RBP13.85□□□□□ -0.19
SEC24A-202ENST00000398844 ZEB1P37275 1124 aaPredicted RBP13.84□□□□□ -0.19
SEC24A-202ENST00000398844 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.8□□□□□ -0.2
SEC24A-202ENST00000398844 HNRNPUL2Q1KMD3 747 aaKnown RBP13.75□□□□□ -0.21
SEC24A-202ENST00000398844 ITGAEP38570 1179 aa13.75□□□□□ -0.21
SEC24A-202ENST00000398844 CENPBP07199 599 aaPredicted RBP13.56□□□□□ -0.24
SEC24A-202ENST00000398844 RSF1Q96T23 1441 aaPredicted RBP13.52□□□□□ -0.25
SEC24A-202ENST00000398844 DCAF1Q9Y4B6 1507 aa13.45□□□□□ -0.26
SEC24A-202ENST00000398844 RB1CC1Q8TDY2 1594 aa13.42□□□□□ -0.26
SEC24A-202ENST00000398844 DIEXFQ68CQ4 756 aaKnown RBP13.42□□□□□ -0.26
SEC24A-202ENST00000398844 CECR2Q9BXF3 1484 aa13.41□□□□□ -0.26
SEC24A-202ENST00000398844 P3H3Q8IVL6 736 aa13.38□□□□□ -0.27
SEC24A-202ENST00000398844 FAM50AQ14320 339 aaKnown RBP13.38□□□□□ -0.27
SEC24A-202ENST00000398844 CNGB1Q14028 1251 aaPredicted RBP13.37□□□□□ -0.27
SEC24A-202ENST00000398844 PELP1Q8IZL8 1130 aaKnown RBP13.36□□□□□ -0.27
SEC24A-202ENST00000398844 CSRNP3Q8WYN3 585 aa13.35□□□□□ -0.27
SEC24A-202ENST00000398844 NEUROD1Q13562 356 aa13.32□□□□□ -0.28
SEC24A-202ENST00000398844 NACADO15069 1562 aa13.32□□□□□ -0.28
SEC24A-202ENST00000398844 WIZO95785 1651 aa13.3□□□□□ -0.28
SEC24A-202ENST00000398844 ARID3CA6NKF2 412 aa13.29□□□□□ -0.28
SEC24A-202ENST00000398844 POLR3GLQ9BT43 218 aa13.28□□□□□ -0.28
SEC24A-202ENST00000398844 MROH2BQ7Z745 1585 aa13.28□□□□□ -0.28
SEC24A-202ENST00000398844 ABCC8Q09428 1581 aa13.24□□□□□ -0.29
SEC24A-202ENST00000398844 GTF3C3Q9Y5Q9 886 aa13.19□□□□□ -0.3
SEC24A-202ENST00000398844 ZNF316A6NFI3 1004 aaPredicted RBP13.14□□□□□ -0.31
SEC24A-202ENST00000398844 CEP162Q5TB80 1403 aa13.14□□□□□ -0.31
SEC24A-202ENST00000398844 TRIM52Q96A61 297 aa13.13□□□□□ -0.31
SEC24A-202ENST00000398844 SOGA1O94964 1423 aa13.13□□□□□ -0.31
SEC24A-202ENST00000398844 FBLN2P98095 1184 aa13.11□□□□□ -0.31
SEC24A-202ENST00000398844 BAZ1AQ9NRL2 1556 aaPredicted RBP13.11□□□□□ -0.31
SEC24A-202ENST00000398844 NEFLP07196 543 aa13.11□□□□□ -0.31
SEC24A-202ENST00000398844 CCDC88BA6NC98 1476 aa13.1□□□□□ -0.31
SEC24A-202ENST00000398844 BCANQ96GW7 911 aa13.1□□□□□ -0.31
SEC24A-202ENST00000398844 BAZ1BQ9UIG0 1483 aaKnown RBP13.08□□□□□ -0.31
SEC24A-202ENST00000398844 MYT1LQ9UL68 1186 aa13.08□□□□□ -0.32
SEC24A-202ENST00000398844 WRNQ14191 1432 aaPredicted RBP eCLIP13.05□□□□□ -0.32
SEC24A-202ENST00000398844 ERICH6Q7L0X2 663 aa13.04□□□□□ -0.32
SEC24A-202ENST00000398844 CLIP1P30622 1438 aa13.04□□□□□ -0.32
SEC24A-202ENST00000398844 GOLGA3Q08378 1498 aa13.03□□□□□ -0.32
SEC24A-202ENST00000398844 ACIN1Q9UKV3 1341 aaKnown RBP13.02□□□□□ -0.33
SEC24A-202ENST00000398844 ZNF326Q5BKZ1 582 aaKnown RBP13.01□□□□□ -0.33
SEC24A-202ENST00000398844 SCAF1Q9H7N4 1312 aaKnown RBP12.98□□□□□ -0.33
SEC24A-202ENST00000398844 HIRIP3Q9BW71 556 aaPredicted RBP12.97□□□□□ -0.33
SEC24A-202ENST00000398844 TOP2AP11388 1531 aaKnown RBP12.94□□□□□ -0.34
SEC24A-202ENST00000398844 ZNF777Q9ULD5 760 aaPredicted RBP12.93□□□□□ -0.34
SEC24A-202ENST00000398844 RUSC2Q8N2Y8 1516 aa12.93□□□□□ -0.34
SEC24A-202ENST00000398844 CHIC2Q9UKJ5 165 aa12.93□□□□□ -0.34
SEC24A-202ENST00000398844 SMARCA4P51532 1647 aa12.92□□□□□ -0.34
SEC24A-202ENST00000398844 MIER1Q8N108 512 aa12.92□□□□□ -0.34
SEC24A-202ENST00000398844 TNIKQ9UKE5 1360 aa12.92□□□□□ -0.34
SEC24A-202ENST00000398844 CEP164Q9UPV0 1460 aa12.88□□□□□ -0.35
SEC24A-202ENST00000398844 ANP32CO43423 234 aa12.86□□□□□ -0.35
SEC24A-202ENST00000398844 DDX10Q13206 875 aaKnown RBP12.85□□□□□ -0.35
SEC24A-202ENST00000398844 SLC4A1APQ9BWU0 796 aaKnown RBP12.83□□□□□ -0.36
SEC24A-202ENST00000398844 EEA1Q15075 1411 aa12.82□□□□□ -0.36
SEC24A-202ENST00000398844 SMARCA2P51531 1590 aa12.8□□□□□ -0.36
SEC24A-202ENST00000398844 KANK4Q5T7N3 995 aaPredicted RBP12.79□□□□□ -0.36
SEC24A-202ENST00000398844 RRP7BPQ9NSQ0 103 aa12.78□□□□□ -0.36
SEC24A-202ENST00000398844 KIF27Q86VH2 1401 aa12.78□□□□□ -0.36
SEC24A-202ENST00000398844 CUX2O14529 1486 aa12.74□□□□□ -0.37
SEC24A-202ENST00000398844 TONSLQ96HA7 1378 aa12.74□□□□□ -0.37
SEC24A-202ENST00000398844 SIN3AQ96ST3 1273 aa12.74□□□□□ -0.37
SEC24A-202ENST00000398844 RAPGEF2Q9Y4G8 1499 aa12.74□□□□□ -0.37
SEC24A-202ENST00000398844 SENP3-EIF4A1A0A087X0R7 540 aa12.73□□□□□ -0.37
SEC24A-202ENST00000398844 EIF4G1Q04637 1599 aaKnown RBP12.72□□□□□ -0.37
SEC24A-202ENST00000398844 MTUS2Q5JR59 1369 aa12.72□□□□□ -0.37
SEC24A-202ENST00000398844 FKBP8Q14318 412 aa12.71□□□□□ -0.37
SEC24A-202ENST00000398844 ATAD2BQ9ULI0 1458 aa12.7□□□□□ -0.38
SEC24A-202ENST00000398844 IRX6P78412 446 aaPredicted RBP12.67□□□□□ -0.38
SEC24A-202ENST00000398844 FAM9BQ8IZU0 186 aa12.67□□□□□ -0.38
SEC24A-202ENST00000398844 VPS8Q8N3P4 1428 aa12.65□□□□□ -0.38
SEC24A-202ENST00000398844 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.65□□□□□ -0.387e-7■□□□□ 9.1
SEC24A-202ENST00000398844 CARMIL1Q5VZK9 1371 aa12.64□□□□□ -0.39
SEC24A-202ENST00000398844 KDM2AQ9Y2K7 1162 aa12.63□□□□□ -0.39
SEC24A-202ENST00000398844 SENP3Q9H4L4 574 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms