RNA–Protein interactions for RNA: ENST00000400960.6

CR1-206, Transcript of complement C3b/C4b receptor 1 (Knops blood group), humanhuman

TSL 1 (best) BASIC

Gene CR1, Length 6,959 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR1-206ENST00000400960 DCAF8L2P0C7V8 631 aa14.81□□□□□ -0.04
CR1-206ENST00000400960 EHMT2Q96KQ7 1210 aa14.13□□□□□ -0.15
CR1-206ENST00000400960 SUPT5HO00267 1087 aaKnown RBP14.09□□□□□ -0.15
CR1-206ENST00000400960 PELP1Q8IZL8 1130 aaKnown RBP13.94□□□□□ -0.18
CR1-206ENST00000400960 SHROOM4Q9ULL8 1493 aa13.81□□□□□ -0.2
CR1-206ENST00000400960 TTBK1Q5TCY1 1321 aaPredicted RBP13.66□□□□□ -0.22
CR1-206ENST00000400960 ERICH6Q7L0X2 663 aa13.63□□□□□ -0.23
CR1-206ENST00000400960 APLP2Q06481 763 aa13.52□□□□□ -0.25
CR1-206ENST00000400960 FAM9AQ8IZU1 332 aaPredicted RBP13.43□□□□□ -0.26
CR1-206ENST00000400960 PCGF6Q9BYE7 350 aa13.41□□□□□ -0.26
CR1-206ENST00000400960 RANGAP1P46060 587 aaPredicted RBP13.36□□□□□ -0.27
CR1-206ENST00000400960 CCER1Q8TC90 406 aaPredicted RBP13.33□□□□□ -0.28
CR1-206ENST00000400960 CENPBP07199 599 aaPredicted RBP13.3□□□□□ -0.28
CR1-206ENST00000400960 YTHDC1Q96MU7 727 aaKnown RBP13.28□□□□□ -0.28
CR1-206ENST00000400960 MYT1Q01538 1121 aa13.25□□□□□ -0.29
CR1-206ENST00000400960 ATP1B4Q9UN42 357 aaPredicted RBP13.21□□□□□ -0.3
CR1-206ENST00000400960 NEFLP07196 543 aa13.1□□□□□ -0.31
CR1-206ENST00000400960 NISCHQ9Y2I1 1504 aa13.08□□□□□ -0.32
CR1-206ENST00000400960 ZEB1P37275 1124 aaPredicted RBP13.03□□□□□ -0.32
CR1-206ENST00000400960 PPARGC1BQ86YN6 1023 aaKnown RBP12.99□□□□□ -0.33
CR1-206ENST00000400960 TRIM41Q8WV44 630 aa12.91□□□□□ -0.34
CR1-206ENST00000400960 UBTFP17480 764 aaKnown RBP12.89□□□□□ -0.35
CR1-206ENST00000400960 DAXXQ9UER7 740 aaPredicted RBP12.89□□□□□ -0.35
CR1-206ENST00000400960 POLR3GLQ9BT43 218 aa12.86□□□□□ -0.35
CR1-206ENST00000400960 CNGB1Q14028 1251 aaPredicted RBP12.83□□□□□ -0.35
CR1-206ENST00000400960 ITGAEP38570 1179 aa12.73□□□□□ -0.37
CR1-206ENST00000400960 MYT1LQ9UL68 1186 aa12.69□□□□□ -0.38
CR1-206ENST00000400960 CHIC1Q5VXU3 224 aa12.68□□□□□ -0.38
CR1-206ENST00000400960 ZNF316A6NFI3 1004 aaPredicted RBP12.62□□□□□ -0.39
CR1-206ENST00000400960 SLC4A1APQ9BWU0 796 aaKnown RBP12.61□□□□□ -0.39
CR1-206ENST00000400960 HRCP23327 699 aa12.6□□□□□ -0.39
CR1-206ENST00000400960 TRIM26Q12899 539 aaPredicted RBP12.59□□□□□ -0.39
CR1-206ENST00000400960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.57□□□□□ -0.4
CR1-206ENST00000400960 HNRNPUL2Q1KMD3 747 aaKnown RBP12.57□□□□□ -0.4
CR1-206ENST00000400960 RTL5Q5HYW3 569 aaPredicted RBP12.56□□□□□ -0.4
CR1-206ENST00000400960 CLSPNQ9HAW4 1339 aa12.54□□□□□ -0.4
CR1-206ENST00000400960 BCANQ96GW7 911 aa12.48□□□□□ -0.41
CR1-206ENST00000400960 LOC105371045A0A1W2PR82 267 aa12.44□□□□□ -0.42
CR1-206ENST00000400960 BCL11AQ9H165 835 aa12.38□□□□□ -0.43
CR1-206ENST00000400960 DIEXFQ68CQ4 756 aaKnown RBP12.38□□□□□ -0.43
CR1-206ENST00000400960 NEUROD1Q13562 356 aa12.3□□□□□ -0.44
CR1-206ENST00000400960 GTF3C3Q9Y5Q9 886 aa12.28□□□□□ -0.44
CR1-206ENST00000400960 FAM50AQ14320 339 aaKnown RBP12.28□□□□□ -0.44
CR1-206ENST00000400960 SLC24A1O60721 1099 aa12.25□□□□□ -0.45
CR1-206ENST00000400960 TRIM52Q96A61 297 aa12.25□□□□□ -0.45
CR1-206ENST00000400960 CDK11AQ9UQ88 783 aaPredicted RBP12.23□□□□□ -0.45
CR1-206ENST00000400960 ZNF326Q5BKZ1 582 aaKnown RBP12.2□□□□□ -0.46
CR1-206ENST00000400960 ZBTB47Q9UFB7 747 aaPredicted RBP12.19□□□□□ -0.46
CR1-206ENST00000400960 CANXP27824 592 aaKnown RBP12.17□□□□□ -0.46
CR1-206ENST00000400960 NPM2Q86SE8 214 aaKnown RBP12.16□□□□□ -0.46
CR1-206ENST00000400960 ANP32CO43423 234 aa12.13□□□□□ -0.47
CR1-206ENST00000400960 EIF5BO60841 1220 aaKnown RBP12.11□□□□□ -0.47
CR1-206ENST00000400960 ANP32AP39687 249 aaKnown RBP12.04□□□□□ -0.48
CR1-206ENST00000400960 ARXQ96QS3 562 aa11.97□□□□□ -0.49
CR1-206ENST00000400960 ARID3CA6NKF2 412 aa11.94□□□□□ -0.5
CR1-206ENST00000400960 NBR1Q14596 966 aa11.94□□□□□ -0.5
CR1-206ENST00000400960 ACIN1Q9UKV3 1341 aaKnown RBP11.93□□□□□ -0.5
CR1-206ENST00000400960 ANP32BQ92688 251 aaKnown RBP11.92□□□□□ -0.5
CR1-206ENST00000400960 FKBP8Q14318 412 aa11.92□□□□□ -0.5
CR1-206ENST00000400960 NEFMP07197 916 aa11.92□□□□□ -0.5
CR1-206ENST00000400960 HSP90AA1P07900 732 aaKnown RBP11.91□□□□□ -0.5
CR1-206ENST00000400960 FBLN2P98095 1184 aa11.87□□□□□ -0.51
CR1-206ENST00000400960 SALL2Q9Y467 1007 aaPredicted RBP11.87□□□□□ -0.51
CR1-206ENST00000400960 P3H3Q8IVL6 736 aa11.85□□□□□ -0.51
CR1-206ENST00000400960 PLPPR3Q6T4P5 718 aa11.84□□□□□ -0.51
CR1-206ENST00000400960 GLIPR1L2Q4G1C9 344 aa11.81□□□□□ -0.52
CR1-206ENST00000400960 ZNF777Q9ULD5 760 aaPredicted RBP11.81□□□□□ -0.52
CR1-206ENST00000400960 FAM9BQ8IZU0 186 aa11.8□□□□□ -0.52
CR1-206ENST00000400960 PABPN1Q86U42 306 aaKnown RBP eCLIP11.77□□□□□ -0.52
CR1-206ENST00000400960 UPF2Q9HAU5 1272 aaKnown RBP11.77□□□□□ -0.52
CR1-206ENST00000400960 HNRNPUQ00839 825 aaKnown RBP eCLIP11.76□□□□□ -0.53
CR1-206ENST00000400960 IRX6P78412 446 aaPredicted RBP11.75□□□□□ -0.53
CR1-206ENST00000400960 CHGAP10645 457 aaKnown RBP11.74□□□□□ -0.53
CR1-206ENST00000400960 DDX10Q13206 875 aaKnown RBP11.7□□□□□ -0.54
CR1-206ENST00000400960 CCDC136Q96JN2 1154 aa11.68□□□□□ -0.54
CR1-206ENST00000400960 TPRNQ4KMQ1 711 aa11.67□□□□□ -0.54
CR1-206ENST00000400960 STAG3Q9UJ98 1225 aa11.66□□□□□ -0.54
CR1-206ENST00000400960 SENP3Q9H4L4 574 aaPredicted RBP11.66□□□□□ -0.54
CR1-206ENST00000400960 TONSLQ96HA7 1378 aa11.63□□□□□ -0.55
CR1-206ENST00000400960 SCAF1Q9H7N4 1312 aaKnown RBP11.63□□□□□ -0.55
CR1-206ENST00000400960 PLEKHG5O94827 1062 aa11.63□□□□□ -0.55
CR1-206ENST00000400960 A0A0G2JS52 829 aa11.61□□□□□ -0.55
CR1-206ENST00000400960 ZBTB7CA1YPR0 619 aa11.61□□□□□ -0.55
CR1-206ENST00000400960 CDK11BP21127 795 aaKnown RBP11.61□□□□□ -0.55
CR1-206ENST00000400960 SENP3-EIF4A1A0A087X0R7 540 aa11.6□□□□□ -0.55
CR1-206ENST00000400960 ESF1Q9H501 851 aaKnown RBP11.6□□□□□ -0.55
CR1-206ENST00000400960 WDR43Q15061 677 aaKnown RBP eCLIP11.6□□□□□ -0.55
CR1-206ENST00000400960 TMC1Q8TDI8 760 aa11.6□□□□□ -0.55
CR1-206ENST00000400960 HIRIP3Q9BW71 556 aaPredicted RBP11.59□□□□□ -0.55
CR1-206ENST00000400960 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.59□□□□□ -0.55
CR1-206ENST00000400960 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.59□□□□□ -0.55
CR1-206ENST00000400960 TULP1O00294 542 aaPredicted RBP11.59□□□□□ -0.55
CR1-206ENST00000400960 NCLP19338 710 aaKnown RBP11.57□□□□□ -0.56
CR1-206ENST00000400960 KDM2AQ9Y2K7 1162 aa11.57□□□□□ -0.56
CR1-206ENST00000400960 RTN4Q9NQC3 1192 aaKnown RBP11.57□□□□□ -0.56
CR1-206ENST00000400960 CHIC2Q9UKJ5 165 aa11.56□□□□□ -0.56
CR1-206ENST00000400960 TRIM44Q96DX7 344 aaPredicted RBP11.55□□□□□ -0.56
CR1-206ENST00000400960 ABCC9O60706 1549 aa11.55□□□□□ -0.56
CR1-206ENST00000400960 MYH16Q9H6N6 1097 aa11.53□□□□□ -0.56
CR1-206ENST00000400960 MRS2Q9HD23 443 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms