RNA–Protein interactions for RNA: ENST00000452490.3

CASP7-207, Transcript of caspase 7, humanhuman

TSL 2 BASIC

Gene CASP7, Length 2,271 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP7-207ENST00000452490 NISCHQ9Y2I1 1504 aa18.2■□□□□ 0.5
CASP7-207ENST00000452490 CHIC1Q5VXU3 224 aa17.78■□□□□ 0.44
CASP7-207ENST00000452490 AEBP2Q6ZN18 517 aaPredicted RBP17.43■□□□□ 0.38
CASP7-207ENST00000452490 PHF23Q9BUL5 403 aaPredicted RBP15.82■□□□□ 0.12
CASP7-207ENST00000452490 CCDC180Q9P1Z9 1646 aa15.69■□□□□ 0.1
CASP7-207ENST00000452490 ZCCHC6Q5VYS8 1495 aaKnown RBP15.39■□□□□ 0.05
CASP7-207ENST00000452490 SHROOM4Q9ULL8 1493 aa15.12■□□□□ 0.01
CASP7-207ENST00000452490 DCAF1Q9Y4B6 1507 aa15.07■□□□□ 0
CASP7-207ENST00000452490 DCAF8L2P0C7V8 631 aa14.86□□□□□ -0.03
CASP7-207ENST00000452490 PLPPR3Q6T4P5 718 aa14.82□□□□□ -0.04
CASP7-207ENST00000452490 SUPT5HO00267 1087 aaKnown RBP14.77□□□□□ -0.05
CASP7-207ENST00000452490 MYO15BQ96JP2 1530 aa14.73□□□□□ -0.05
CASP7-207ENST00000452490 HRCP23327 699 aa14.52□□□□□ -0.08
CASP7-207ENST00000452490 SENP3Q9H4L4 574 aaPredicted RBP14.52□□□□□ -0.08
CASP7-207ENST00000452490 NACADO15069 1562 aa14.5□□□□□ -0.09
CASP7-207ENST00000452490 ABCC9O60706 1549 aa14.5□□□□□ -0.09
CASP7-207ENST00000452490 SCRIBQ14160 1630 aa14.47□□□□□ -0.09
CASP7-207ENST00000452490 RB1CC1Q8TDY2 1594 aa14.28□□□□□ -0.12
CASP7-207ENST00000452490 RSF1Q96T23 1441 aaPredicted RBP14.28□□□□□ -0.12
CASP7-207ENST00000452490 EHMT2Q96KQ7 1210 aa14.2□□□□□ -0.14
CASP7-207ENST00000452490 PCGF6Q9BYE7 350 aa14.18□□□□□ -0.14
CASP7-207ENST00000452490 PPARGC1BQ86YN6 1023 aaKnown RBP14.16□□□□□ -0.14
CASP7-207ENST00000452490 CECR2Q9BXF3 1484 aa14.09□□□□□ -0.15
CASP7-207ENST00000452490 MROH2BQ7Z745 1585 aa14.07□□□□□ -0.16
CASP7-207ENST00000452490 BAZ1AQ9NRL2 1556 aaPredicted RBP14.03□□□□□ -0.16
CASP7-207ENST00000452490 UNC13AQ9UPW8 1703 aa14□□□□□ -0.17
CASP7-207ENST00000452490 ADRA2BP18089 450 aa14□□□□□ -0.17
CASP7-207ENST00000452490 KCNA4P22459 653 aa14□□□□□ -0.17
CASP7-207ENST00000452490 WIZO95785 1651 aa13.99□□□□□ -0.17
CASP7-207ENST00000452490 SMARCA4P51532 1647 aa13.91□□□□□ -0.18
CASP7-207ENST00000452490 TRIM41Q8WV44 630 aa13.87□□□□□ -0.19
CASP7-207ENST00000452490 TOP2AP11388 1531 aaKnown RBP13.87□□□□□ -0.19
CASP7-207ENST00000452490 PELP1Q8IZL8 1130 aaKnown RBP13.86□□□□□ -0.19
CASP7-207ENST00000452490 BICRAQ9NZM4 1560 aa13.82□□□□□ -0.2
CASP7-207ENST00000452490 LOC105371045A0A1W2PR82 267 aa13.82□□□□□ -0.2
CASP7-207ENST00000452490 TRIM26Q12899 539 aaPredicted RBP13.82□□□□□ -0.2
CASP7-207ENST00000452490 EIF4G1Q04637 1599 aaKnown RBP13.81□□□□□ -0.2
CASP7-207ENST00000452490 SMARCA2P51531 1590 aa13.74□□□□□ -0.21
CASP7-207ENST00000452490 PEG3Q9GZU2 1588 aa13.72□□□□□ -0.21
CASP7-207ENST00000452490 CCDC88BA6NC98 1476 aa13.71□□□□□ -0.21
CASP7-207ENST00000452490 PPP6R1Q9UPN7 881 aa13.7□□□□□ -0.22
CASP7-207ENST00000452490 ZEB1P37275 1124 aaPredicted RBP13.69□□□□□ -0.22
CASP7-207ENST00000452490 SCAF1Q9H7N4 1312 aaKnown RBP13.67□□□□□ -0.22
CASP7-207ENST00000452490 PABPN1Q86U42 306 aaKnown RBP eCLIP13.66□□□□□ -0.22
CASP7-207ENST00000452490 FAM9AQ8IZU1 332 aaPredicted RBP13.61□□□□□ -0.23
CASP7-207ENST00000452490 ABCC8Q09428 1581 aa13.57□□□□□ -0.24
CASP7-207ENST00000452490 ATAD2BQ9ULI0 1458 aa13.56□□□□□ -0.24
CASP7-207ENST00000452490 CSRNP3Q8WYN3 585 aa13.54□□□□□ -0.24
CASP7-207ENST00000452490 BAZ1BQ9UIG0 1483 aaKnown RBP13.52□□□□□ -0.24
CASP7-207ENST00000452490 EEA1Q15075 1411 aa13.5□□□□□ -0.25
CASP7-207ENST00000452490 FOXD1Q16676 465 aa13.46□□□□□ -0.25
CASP7-207ENST00000452490 WRNQ14191 1432 aaPredicted RBP eCLIP13.43□□□□□ -0.26
CASP7-207ENST00000452490 SLC4A1APQ9BWU0 796 aaKnown RBP13.43□□□□□ -0.26
CASP7-207ENST00000452490 HMGXB3Q12766 1538 aa13.41□□□□□ -0.26
CASP7-207ENST00000452490 SOGA1O94964 1423 aa13.39□□□□□ -0.27
CASP7-207ENST00000452490 NCAPD3P42695 1498 aa13.37□□□□□ -0.27
CASP7-207ENST00000452490 ACIN1Q9UKV3 1341 aaKnown RBP13.36□□□□□ -0.27
CASP7-207ENST00000452490 SYNJ1O43426 1573 aa13.36□□□□□ -0.27
CASP7-207ENST00000452490 TNIKQ9UKE5 1360 aa13.36□□□□□ -0.27
CASP7-207ENST00000452490 MYT1Q01538 1121 aa13.34□□□□□ -0.27
CASP7-207ENST00000452490 GOLGA3Q08378 1498 aa13.32□□□□□ -0.28
CASP7-207ENST00000452490 NEUROD1Q13562 356 aa13.32□□□□□ -0.28
CASP7-207ENST00000452490 CEP162Q5TB80 1403 aa13.31□□□□□ -0.28
CASP7-207ENST00000452490 RUSC2Q8N2Y8 1516 aa13.31□□□□□ -0.28
CASP7-207ENST00000452490 KIF21BO75037 1637 aa13.3□□□□□ -0.28
CASP7-207ENST00000452490 TOP2BQ02880 1626 aa13.29□□□□□ -0.28
CASP7-207ENST00000452490 BIVM-ERCC5R4GMW8 1640 aa13.28□□□□□ -0.28
CASP7-207ENST00000452490 CEP164Q9UPV0 1460 aa13.27□□□□□ -0.28
CASP7-207ENST00000452490 UBTFP17480 764 aaKnown RBP13.21□□□□□ -0.29
CASP7-207ENST00000452490 PPP4R3CPQ6ZMV5 832 aa13.21□□□□□ -0.29
CASP7-207ENST00000452490 GTF3C3Q9Y5Q9 886 aa13.21□□□□□ -0.29
CASP7-207ENST00000452490 CFTRP13569 1480 aa13.2□□□□□ -0.3
CASP7-207ENST00000452490 PRDM2Q13029 1718 aa13.19□□□□□ -0.3
CASP7-207ENST00000452490 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.18□□□□□ -0.3
CASP7-207ENST00000452490 CENPBP07199 599 aaPredicted RBP13.16□□□□□ -0.3
CASP7-207ENST00000452490 DIEXFQ68CQ4 756 aaKnown RBP13.15□□□□□ -0.3
CASP7-207ENST00000452490 CCER1Q8TC90 406 aaPredicted RBP13.14□□□□□ -0.31
CASP7-207ENST00000452490 CUX1P39880 1505 aa13.13□□□□□ -0.31
CASP7-207ENST00000452490 ERICH3Q5RHP9 1530 aa13.12□□□□□ -0.31
CASP7-207ENST00000452490 CLIP1P30622 1438 aa13.11□□□□□ -0.31
CASP7-207ENST00000452490 RAPGEF2Q9Y4G8 1499 aa13.1□□□□□ -0.31
CASP7-207ENST00000452490 PRXQ9BXM0 1461 aa13.08□□□□□ -0.32
CASP7-207ENST00000452490 CC2D2AQ9P2K1 1620 aa13.07□□□□□ -0.32
CASP7-207ENST00000452490 VPS8Q8N3P4 1428 aa13.07□□□□□ -0.32
CASP7-207ENST00000452490 KIF27Q86VH2 1401 aa13.06□□□□□ -0.32
CASP7-207ENST00000452490 CADPSQ9ULU8 1353 aa13.05□□□□□ -0.32
CASP7-207ENST00000452490 NCBP3Q53F19 620 aaKnown RBP13.03□□□□□ -0.32
CASP7-207ENST00000452490 TTBK1Q5TCY1 1321 aaPredicted RBP12.98□□□□□ -0.33
CASP7-207ENST00000452490 NPM3O75607 178 aaKnown RBP12.96□□□□□ -0.33
CASP7-207ENST00000452490 ZNF316A6NFI3 1004 aaPredicted RBP12.95□□□□□ -0.34
CASP7-207ENST00000452490 APLP2Q06481 763 aa12.95□□□□□ -0.34
CASP7-207ENST00000452490 FGD5Q6ZNL6 1462 aa12.93□□□□□ -0.34
CASP7-207ENST00000452490 ARAP1Q96P48 1450 aa12.93□□□□□ -0.34
CASP7-207ENST00000452490 ZBTB22O15209 634 aa12.92□□□□□ -0.34
CASP7-207ENST00000452490 PIAS4Q8N2W9 510 aaPredicted RBP12.92□□□□□ -0.34
CASP7-207ENST00000452490 CUX2O14529 1486 aa12.92□□□□□ -0.34
CASP7-207ENST00000452490 FANCD2Q9BXW9 1451 aa12.92□□□□□ -0.34
CASP7-207ENST00000452490 SLC24A1O60721 1099 aa12.9□□□□□ -0.34
CASP7-207ENST00000452490 DNMBPQ6XZF7 1577 aa12.9□□□□□ -0.34
CASP7-207ENST00000452490 IGF1RP08069 1367 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms