RNA–Protein interactions for RNA: ENST00000412134.5

LINC01249-201, Transcript of long intergenic non-protein coding RNA 1249, humanhuman

TSL 1 (best) BASIC

Gene LINC01249, Length 2,663 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01249-201ENST00000412134 CHIC1Q5VXU3 224 aa13.59□□□□□ -0.23
LINC01249-201ENST00000412134 AEBP2Q6ZN18 517 aaPredicted RBP12.98□□□□□ -0.33
LINC01249-201ENST00000412134 NISCHQ9Y2I1 1504 aa12.37□□□□□ -0.43
LINC01249-201ENST00000412134 PHF23Q9BUL5 403 aaPredicted RBP11.94□□□□□ -0.5
LINC01249-201ENST00000412134 ABCC9O60706 1549 aa11.44□□□□□ -0.58
LINC01249-201ENST00000412134 PLPPR3Q6T4P5 718 aa11.42□□□□□ -0.58
LINC01249-201ENST00000412134 CCDC180Q9P1Z9 1646 aa11.28□□□□□ -0.6
LINC01249-201ENST00000412134 SENP3Q9H4L4 574 aaPredicted RBP11.02□□□□□ -0.64
LINC01249-201ENST00000412134 DNAJC5BQ9UF47 199 aa11□□□□□ -0.65
LINC01249-201ENST00000412134 EHMT2Q96KQ7 1210 aa10.92□□□□□ -0.66
LINC01249-201ENST00000412134 RB1CC1Q8TDY2 1594 aa10.84□□□□□ -0.67
LINC01249-201ENST00000412134 KCNA4P22459 653 aa10.72□□□□□ -0.69
LINC01249-201ENST00000412134 NACADO15069 1562 aa10.72□□□□□ -0.69
LINC01249-201ENST00000412134 UNC13AQ9UPW8 1703 aa10.59□□□□□ -0.71
LINC01249-201ENST00000412134 PABPN1Q86U42 306 aaKnown RBP eCLIP10.57□□□□□ -0.72
LINC01249-201ENST00000412134 BICRAQ9NZM4 1560 aa10.54□□□□□ -0.72
LINC01249-201ENST00000412134 MYO15BQ96JP2 1530 aa10.53□□□□□ -0.72
LINC01249-201ENST00000412134 CSRNP3Q8WYN3 585 aa10.51□□□□□ -0.73
LINC01249-201ENST00000412134 ADRA2BP18089 450 aa10.48□□□□□ -0.73
LINC01249-201ENST00000412134 SHROOM4Q9ULL8 1493 aa10.45□□□□□ -0.74
LINC01249-201ENST00000412134 SLC24A1O60721 1099 aa10.42□□□□□ -0.74
LINC01249-201ENST00000412134 SLC4A1APQ9BWU0 796 aaKnown RBP10.42□□□□□ -0.74
LINC01249-201ENST00000412134 DCAF8L2P0C7V8 631 aa10.4□□□□□ -0.75
LINC01249-201ENST00000412134 CECR2Q9BXF3 1484 aa10.38□□□□□ -0.75
LINC01249-201ENST00000412134 CC2D2AQ9P2K1 1620 aa10.37□□□□□ -0.75
LINC01249-201ENST00000412134 DNAJC5Q9H3Z4 198 aa10.37□□□□□ -0.75
LINC01249-201ENST00000412134 EIF4G1Q04637 1599 aaKnown RBP10.29□□□□□ -0.76
LINC01249-201ENST00000412134 DCAF1Q9Y4B6 1507 aa10.27□□□□□ -0.77
LINC01249-201ENST00000412134 PPP6R1Q9UPN7 881 aa10.21□□□□□ -0.77
LINC01249-201ENST00000412134 ZCCHC6Q5VYS8 1495 aaKnown RBP10.2□□□□□ -0.78
LINC01249-201ENST00000412134 NCBP3Q53F19 620 aaKnown RBP10.19□□□□□ -0.78
LINC01249-201ENST00000412134 AMER1Q5JTC6 1135 aaPredicted RBP10.16□□□□□ -0.78
LINC01249-201ENST00000412134 SCRIBQ14160 1630 aa10.15□□□□□ -0.78
LINC01249-201ENST00000412134 PPP4R3CPQ6ZMV5 832 aa10.11□□□□□ -0.79
LINC01249-201ENST00000412134 CUX2O14529 1486 aa10.08□□□□□ -0.8
LINC01249-201ENST00000412134 FOXD1Q16676 465 aa10.03□□□□□ -0.8
LINC01249-201ENST00000412134 RTN4Q9NQC3 1192 aaKnown RBP9.99□□□□□ -0.81
LINC01249-201ENST00000412134 NPM3O75607 178 aaKnown RBP9.91□□□□□ -0.82
LINC01249-201ENST00000412134 ERCC6Q03468 1493 aa9.91□□□□□ -0.82
LINC01249-201ENST00000412134 NCAPD3P42695 1498 aa9.89□□□□□ -0.83
LINC01249-201ENST00000412134 ZBTB22O15209 634 aa9.86□□□□□ -0.83
LINC01249-201ENST00000412134 HMGXB3Q12766 1538 aa9.8□□□□□ -0.84
LINC01249-201ENST00000412134 ATAD2BQ9ULI0 1458 aa9.79□□□□□ -0.84
LINC01249-201ENST00000412134 THOC2Q8NI27 1593 aaKnown RBP9.78□□□□□ -0.84
LINC01249-201ENST00000412134 SMARCA2P51531 1590 aa9.77□□□□□ -0.85
LINC01249-201ENST00000412134 NESP48681 1621 aa9.75□□□□□ -0.85
LINC01249-201ENST00000412134 FOXD4L1Q9NU39 408 aa9.74□□□□□ -0.85
LINC01249-201ENST00000412134 CNKSR2Q8WXI2 1034 aa9.72□□□□□ -0.85
LINC01249-201ENST00000412134 LAMC3Q9Y6N6 1575 aa9.72□□□□□ -0.85
LINC01249-201ENST00000412134 SMARCA4P51532 1647 aa9.71□□□□□ -0.86
LINC01249-201ENST00000412134 TRIM41Q8WV44 630 aa9.68□□□□□ -0.86
LINC01249-201ENST00000412134 PEG3Q9GZU2 1588 aa9.68□□□□□ -0.86
LINC01249-201ENST00000412134 BAZ1BQ9UIG0 1483 aaKnown RBP9.66□□□□□ -0.86
LINC01249-201ENST00000412134 PIAS4Q8N2W9 510 aaPredicted RBP9.66□□□□□ -0.86
LINC01249-201ENST00000412134 KIF21AQ7Z4S6 1674 aa9.65□□□□□ -0.86
LINC01249-201ENST00000412134 PDS5BQ9NTI5 1447 aa9.64□□□□□ -0.87
LINC01249-201ENST00000412134 BAZ1AQ9NRL2 1556 aaPredicted RBP9.62□□□□□ -0.87
LINC01249-201ENST00000412134 WDR62O43379 1518 aa9.59□□□□□ -0.87
LINC01249-201ENST00000412134 SCAF1Q9H7N4 1312 aaKnown RBP9.59□□□□□ -0.87
LINC01249-201ENST00000412134 MRC2Q9UBG0 1479 aa9.58□□□□□ -0.88
LINC01249-201ENST00000412134 CADPSQ9ULU8 1353 aa9.54□□□□□ -0.88
LINC01249-201ENST00000412134 OSCARQ8IYS5 282 aa9.5□□□□□ -0.89
LINC01249-201ENST00000412134 MROH2BQ7Z745 1585 aa9.49□□□□□ -0.89
LINC01249-201ENST00000412134 CEP164Q9UPV0 1460 aa9.46□□□□□ -0.89
LINC01249-201ENST00000412134 POTEDQ86YR6 584 aa9.46□□□□□ -0.9
LINC01249-201ENST00000412134 ATXN8OSP0DMR3 200 aa9.44□□□□□ -0.9
LINC01249-201ENST00000412134 FKBP8Q14318 412 aa9.44□□□□□ -0.9
LINC01249-201ENST00000412134 RIMBP3CA6NJZ7 1639 aa9.43□□□□□ -0.9
LINC01249-201ENST00000412134 RIMBP3BA6NNM3 1639 aa9.43□□□□□ -0.9
LINC01249-201ENST00000412134 RIMBP3Q9UFD9 1639 aa9.43□□□□□ -0.9
LINC01249-201ENST00000412134 FANCD2Q9BXW9 1451 aa9.42□□□□□ -0.9
LINC01249-201ENST00000412134 CFTRP13569 1480 aa9.39□□□□□ -0.91
LINC01249-201ENST00000412134 ARHGEF11O15085 1522 aa9.37□□□□□ -0.91
LINC01249-201ENST00000412134 URB2Q14146 1524 aaKnown RBP9.36□□□□□ -0.91
LINC01249-201ENST00000412134 WIZO95785 1651 aa9.35□□□□□ -0.91
LINC01249-201ENST00000412134 RNF216Q9NWF9 866 aaPredicted RBP9.34□□□□□ -0.91
LINC01249-201ENST00000412134 IFT140Q96RY7 1462 aa9.31□□□□□ -0.92
LINC01249-201ENST00000412134 PRDM2Q13029 1718 aa9.3□□□□□ -0.92
LINC01249-201ENST00000412134 ZNF608Q9ULD9 1512 aaPredicted RBP9.27□□□□□ -0.92
LINC01249-201ENST00000412134 ARAP1Q96P48 1450 aa9.26□□□□□ -0.93
LINC01249-201ENST00000412134 TOP2AP11388 1531 aaKnown RBP9.26□□□□□ -0.93
LINC01249-201ENST00000412134 PLCB2Q00722 1185 aa9.26□□□□□ -0.93
LINC01249-201ENST00000412134 RSF1Q96T23 1441 aaPredicted RBP9.25□□□□□ -0.93
LINC01249-201ENST00000412134 CYB5RLQ6IPT4 315 aa9.25□□□□□ -0.93
LINC01249-201ENST00000412134 EIF4G3O43432 1585 aaKnown RBP9.24□□□□□ -0.93
LINC01249-201ENST00000412134 BCANQ96GW7 911 aa9.23□□□□□ -0.93
LINC01249-201ENST00000412134 MYCNP04198 464 aaPredicted RBP9.22□□□□□ -0.93
LINC01249-201ENST00000412134 ABCC8Q09428 1581 aa9.22□□□□□ -0.93
LINC01249-201ENST00000412134 CHD1O14646 1710 aa9.22□□□□□ -0.93
LINC01249-201ENST00000412134 TRHP20396 242 aaPredicted RBP9.22□□□□□ -0.93
LINC01249-201ENST00000412134 TOPBP1Q92547 1522 aa9.22□□□□□ -0.93
LINC01249-201ENST00000412134 TARBP1Q13395 1621 aaKnown RBP9.18□□□□□ -0.94
LINC01249-201ENST00000412134 DNMBPQ6XZF7 1577 aa9.18□□□□□ -0.94
LINC01249-201ENST00000412134 CLASP1Q7Z460 1538 aa9.15□□□□□ -0.95
LINC01249-201ENST00000412134 AQRO60306 1485 aaKnown RBP eCLIP9.14□□□□□ -0.95
LINC01249-201ENST00000412134 SLC4A2P04920 1241 aa9.14□□□□□ -0.95
LINC01249-201ENST00000412134 WDR97A6NE52 1622 aa9.13□□□□□ -0.95
LINC01249-201ENST00000412134 CCDC88BA6NC98 1476 aa9.12□□□□□ -0.95
LINC01249-201ENST00000412134 POLA1P09884 1462 aaPredicted RBP9.11□□□□□ -0.95
LINC01249-201ENST00000412134 VSIG10Q8N0Z9 540 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms