RNA–Protein interactions for RNA: ENST00000426428.5

LINC01141-203, Transcript of long intergenic non-protein coding RNA 1141, humanhuman

TSL 1 (best) BASIC

Gene LINC01141, Length 2,993 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01141-203ENST00000426428 NISCHQ9Y2I1 1504 aa23.98■■□□□ 1.43
LINC01141-203ENST00000426428 CCDC180Q9P1Z9 1646 aa20.97■□□□□ 0.95
LINC01141-203ENST00000426428 ABCC9O60706 1549 aa20.53■□□□□ 0.88
LINC01141-203ENST00000426428 DCAF8L2P0C7V8 631 aa20.29■□□□□ 0.84
LINC01141-203ENST00000426428 HRCP23327 699 aa20.13■□□□□ 0.81
LINC01141-203ENST00000426428 PELP1Q8IZL8 1130 aaKnown RBP20.1■□□□□ 0.81
LINC01141-203ENST00000426428 ZCCHC6Q5VYS8 1495 aaKnown RBP20.03■□□□□ 0.8
LINC01141-203ENST00000426428 NACADO15069 1562 aa19.72■□□□□ 0.75
LINC01141-203ENST00000426428 DCAF1Q9Y4B6 1507 aa19.71■□□□□ 0.75
LINC01141-203ENST00000426428 MYT1Q01538 1121 aa19.71■□□□□ 0.75
LINC01141-203ENST00000426428 RB1CC1Q8TDY2 1594 aa19.69■□□□□ 0.74
LINC01141-203ENST00000426428 MYO15BQ96JP2 1530 aa19.62■□□□□ 0.73
LINC01141-203ENST00000426428 PPARGC1BQ86YN6 1023 aaKnown RBP19.57■□□□□ 0.72
LINC01141-203ENST00000426428 PCGF6Q9BYE7 350 aa19.56■□□□□ 0.72
LINC01141-203ENST00000426428 SHROOM4Q9ULL8 1493 aa19.54■□□□□ 0.72
LINC01141-203ENST00000426428 SUPT5HO00267 1087 aaKnown RBP19.52■□□□□ 0.72
LINC01141-203ENST00000426428 SCRIBQ14160 1630 aa19.43■□□□□ 0.7
LINC01141-203ENST00000426428 CHIC1Q5VXU3 224 aa19.37■□□□□ 0.69
LINC01141-203ENST00000426428 PABPN1Q86U42 306 aaKnown RBP eCLIP19.37■□□□□ 0.69
LINC01141-203ENST00000426428 UNC13AQ9UPW8 1703 aa19.19■□□□□ 0.66
LINC01141-203ENST00000426428 BICRAQ9NZM4 1560 aa19.1■□□□□ 0.65
LINC01141-203ENST00000426428 SCAF1Q9H7N4 1312 aaKnown RBP19.06■□□□□ 0.64
LINC01141-203ENST00000426428 TRIM26Q12899 539 aaPredicted RBP19.02■□□□□ 0.64
LINC01141-203ENST00000426428 ZEB1P37275 1124 aaPredicted RBP18.97■□□□□ 0.63
LINC01141-203ENST00000426428 TTBK1Q5TCY1 1321 aaPredicted RBP18.9■□□□□ 0.62
LINC01141-203ENST00000426428 LOC105371045A0A1W2PR82 267 aa18.84■□□□□ 0.61
LINC01141-203ENST00000426428 CECR2Q9BXF3 1484 aa18.76■□□□□ 0.59
LINC01141-203ENST00000426428 PRKCSHP14314 528 aaPredicted RBP18.61■□□□□ 0.57
LINC01141-203ENST00000426428 ACIN1Q9UKV3 1341 aaKnown RBP18.61■□□□□ 0.57
LINC01141-203ENST00000426428 EIF4G1Q04637 1599 aaKnown RBP18.6■□□□□ 0.57
LINC01141-203ENST00000426428 DNAJC5BQ9UF47 199 aa18.58■□□□□ 0.56
LINC01141-203ENST00000426428 MROH2BQ7Z745 1585 aa18.56■□□□□ 0.56
LINC01141-203ENST00000426428 BAZ1AQ9NRL2 1556 aaPredicted RBP18.54■□□□□ 0.56
LINC01141-203ENST00000426428 SMARCA4P51532 1647 aa18.5■□□□□ 0.55
LINC01141-203ENST00000426428 NEUROD1Q13562 356 aa18.49■□□□□ 0.55
LINC01141-203ENST00000426428 RSF1Q96T23 1441 aaPredicted RBP18.49■□□□□ 0.55
LINC01141-203ENST00000426428 CC2D2AQ9P2K1 1620 aa18.45■□□□□ 0.54
LINC01141-203ENST00000426428 GTF3C3Q9Y5Q9 886 aa18.4■□□□□ 0.54
LINC01141-203ENST00000426428 ATAD2BQ9ULI0 1458 aa18.37■□□□□ 0.53
LINC01141-203ENST00000426428 CENPBP07199 599 aaPredicted RBP18.36■□□□□ 0.53
LINC01141-203ENST00000426428 WIZO95785 1651 aa18.35■□□□□ 0.53
LINC01141-203ENST00000426428 SMARCA2P51531 1590 aa18.29■□□□□ 0.52
LINC01141-203ENST00000426428 BCL11AQ9H165 835 aa18.27■□□□□ 0.52
LINC01141-203ENST00000426428 BAZ1BQ9UIG0 1483 aaKnown RBP18.27■□□□□ 0.51
LINC01141-203ENST00000426428 NCAPD3P42695 1498 aa18.25■□□□□ 0.51
LINC01141-203ENST00000426428 PEG3Q9GZU2 1588 aa18.22■□□□□ 0.51
LINC01141-203ENST00000426428 DIEXFQ68CQ4 756 aaKnown RBP18.2■□□□□ 0.5
LINC01141-203ENST00000426428 HMGXB3Q12766 1538 aa18.13■□□□□ 0.49
LINC01141-203ENST00000426428 TRIM41Q8WV44 630 aa18.12■□□□□ 0.49
LINC01141-203ENST00000426428 TOP2AP11388 1531 aaKnown RBP18.11■□□□□ 0.49
LINC01141-203ENST00000426428 ERICH6Q7L0X2 663 aa18.1■□□□□ 0.49
LINC01141-203ENST00000426428 CCER1Q8TC90 406 aaPredicted RBP18.09■□□□□ 0.49
LINC01141-203ENST00000426428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.09■□□□□ 0.49
LINC01141-203ENST00000426428 FAM9AQ8IZU1 332 aaPredicted RBP18.08■□□□□ 0.49
LINC01141-203ENST00000426428 APLP2Q06481 763 aa18.06■□□□□ 0.48
LINC01141-203ENST00000426428 CCDC88BA6NC98 1476 aa17.99■□□□□ 0.47
LINC01141-203ENST00000426428 ZNF316A6NFI3 1004 aaPredicted RBP17.86■□□□□ 0.45
LINC01141-203ENST00000426428 NESP48681 1621 aa17.86■□□□□ 0.45
LINC01141-203ENST00000426428 EHMT2Q96KQ7 1210 aa17.84■□□□□ 0.45
LINC01141-203ENST00000426428 CADPSQ9ULU8 1353 aa17.82■□□□□ 0.44
LINC01141-203ENST00000426428 YTHDC1Q96MU7 727 aaKnown RBP17.8■□□□□ 0.44
LINC01141-203ENST00000426428 CFTRP13569 1480 aa17.74■□□□□ 0.43
LINC01141-203ENST00000426428 MIER1Q8N108 512 aa17.7■□□□□ 0.42
LINC01141-203ENST00000426428 SLC24A1O60721 1099 aa17.69■□□□□ 0.42
LINC01141-203ENST00000426428 WRNQ14191 1432 aaPredicted RBP eCLIP17.69■□□□□ 0.42
LINC01141-203ENST00000426428 LAMC3Q9Y6N6 1575 aa17.67■□□□□ 0.42
LINC01141-203ENST00000426428 ERCC6Q03468 1493 aa17.65■□□□□ 0.42
LINC01141-203ENST00000426428 CLSPNQ9HAW4 1339 aa17.64■□□□□ 0.41
LINC01141-203ENST00000426428 PDS5BQ9NTI5 1447 aa17.64■□□□□ 0.41
LINC01141-203ENST00000426428 FANCD2Q9BXW9 1451 aa17.62■□□□□ 0.41
LINC01141-203ENST00000426428 ANP32EQ9BTT0 268 aa17.6■□□□□ 0.41
LINC01141-203ENST00000426428 CEP164Q9UPV0 1460 aa17.55■□□□□ 0.4
LINC01141-203ENST00000426428 SUPT16HQ9Y5B9 1047 aaKnown RBP17.52■□□□□ 0.4
LINC01141-203ENST00000426428 ABCC8Q09428 1581 aa17.51■□□□□ 0.39
LINC01141-203ENST00000426428 KIF21AQ7Z4S6 1674 aa17.51■□□□□ 0.39
LINC01141-203ENST00000426428 TSHZ2Q9NRE2 1034 aa17.48■□□□□ 0.39
LINC01141-203ENST00000426428 CEP162Q5TB80 1403 aa17.47■□□□□ 0.39
LINC01141-203ENST00000426428 PRDM2Q13029 1718 aa17.42■□□□□ 0.38
LINC01141-203ENST00000426428 MRC2Q9UBG0 1479 aa17.42■□□□□ 0.38
LINC01141-203ENST00000426428 URB2Q14146 1524 aaKnown RBP17.41■□□□□ 0.38
LINC01141-203ENST00000426428 TNIKQ9UKE5 1360 aa17.39■□□□□ 0.37
LINC01141-203ENST00000426428 CUX1P39880 1505 aa17.37■□□□□ 0.37
LINC01141-203ENST00000426428 TOPBP1Q92547 1522 aa17.35■□□□□ 0.37
LINC01141-203ENST00000426428 CSRNP3Q8WYN3 585 aa17.35■□□□□ 0.37
LINC01141-203ENST00000426428 SYNJ1O43426 1573 aa17.33■□□□□ 0.36
LINC01141-203ENST00000426428 THOC2Q8NI27 1593 aaKnown RBP17.33■□□□□ 0.36
LINC01141-203ENST00000426428 DNMBPQ6XZF7 1577 aa17.3■□□□□ 0.36
LINC01141-203ENST00000426428 WDR62O43379 1518 aa17.29■□□□□ 0.36
LINC01141-203ENST00000426428 FGD5Q6ZNL6 1462 aa17.27■□□□□ 0.36
LINC01141-203ENST00000426428 POLA1P09884 1462 aaPredicted RBP17.26■□□□□ 0.35
LINC01141-203ENST00000426428 RAD54L2Q9Y4B4 1467 aa17.25■□□□□ 0.35
LINC01141-203ENST00000426428 HNRNPUL2Q1KMD3 747 aaKnown RBP17.24■□□□□ 0.35
LINC01141-203ENST00000426428 TOP2BQ02880 1626 aa17.24■□□□□ 0.35
LINC01141-203ENST00000426428 SOGA1O94964 1423 aa17.23■□□□□ 0.35
LINC01141-203ENST00000426428 EEA1Q15075 1411 aa17.21■□□□□ 0.35
LINC01141-203ENST00000426428 CUX2O14529 1486 aa17.2■□□□□ 0.34
LINC01141-203ENST00000426428 BIVM-ERCC5R4GMW8 1640 aa17.18■□□□□ 0.34
LINC01141-203ENST00000426428 TDRD9Q8NDG6 1382 aaKnown RBP17.18■□□□□ 0.34
LINC01141-203ENST00000426428 GOLGA3Q08378 1498 aa17.15■□□□□ 0.34
LINC01141-203ENST00000426428 UBTFP17480 764 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms