Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 FREM3-201ENST00000329798 6729 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 AL080251.1-201ENST00000494072 4369 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 CNGA2-201ENST00000329903 2834 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 GJA5-203ENST00000621517 3183 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 PCDHGA1-202ENST00000517417 4604 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 EIF1AD-204ENST00000526451 2761 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 CD302-204ENST00000553424 3866 ntTSL 2 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 TTLL4-202ENST00000392102 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 NAV1-203ENST00000367302 9685 ntTSL 5 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 AL356292.1-201ENST00000283110 373 ntBASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 MIR194-2-201ENST00000384864 85 ntBASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 MIR182-201ENST00000385255 110 ntBASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 IGKV3D-20-201ENST00000390270 445 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 RESP18-202ENST00000392083 626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 U3.37-201ENST00000408528 213 ntBASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 AC004986.1-201ENST00000414855 607 ntBASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 PGAM1P3-201ENST00000420790 565 ntBASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 PGAM4P1-201ENST00000426407 654 ntBASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 AC078809.1-201ENST00000427601 140 ntBASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 RPL18AP15-201ENST00000430258 517 ntBASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 TOMM22P2-201ENST00000430735 237 ntBASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 RPL23AP46-201ENST00000438548 490 ntBASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 ARL17B-202ENST00000450673 743 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 AC005011.1-201ENST00000455206 210 ntBASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 RN7SL614P-201ENST00000461850 280 ntBASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 AC005017.1-201ENST00000482002 490 ntBASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 IGKV3-20-201ENST00000492167 400 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 AC072052.1-201ENST00000496556 306 ntBASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 SSR2-213ENST00000496742 825 ntTSL 3 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 ROPN1L-AS1-201ENST00000513037 189 ntTSL 2 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 RN7SKP209-201ENST00000516888 304 ntBASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 RNU7-116P-201ENST00000516940 62 ntBASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 IGKV2D-36-201ENST00000518643 226 ntBASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 LINC00681-201ENST00000530150 504 ntTSL 2 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 NAT9-204ENST00000578822 839 ntTSL 3 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 AC005329.2-202ENST00000589673 392 ntTSL 3 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 FAM95B1-210ENST00000591605 743 ntTSL 5 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 AC005332.4-201ENST00000592752 579 ntBASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 AC107294.3-201ENST00000609211 526 ntBASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 AC022392.1-201ENST00000609403 744 ntBASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 SMIM11B-204ENST00000623661 1021 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 CYB561A3-201ENST00000294072 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 TMEM255A-203ENST00000371369 3425 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 ZMYND11-207ENST00000397959 4138 ntTSL 2 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 ZNF614-201ENST00000270649 4818 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 BAHCC1-206ENST00000584436 10801 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 ETNK1-201ENST00000266517 7159 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 DAPK1-209ENST00000472284 5759 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 C14orf159-228ENST00000523771 2976 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 ZNF410-224ENST00000615736 1551 ntTSL 5 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 AC009336.3-201ENST00000623777 2620 ntBASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 SLC35A4-202ENST00000514199 3617 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 FAM238C-203ENST00000640121 3620 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 PIP4K2C-201ENST00000354947 2924 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 SLC22A13-201ENST00000311856 2555 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 ZNF30-206ENST00000601957 2583 ntTSL 2 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 MAPK10-310ENST00000641384 2213 ntBASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 HCP5B-201ENST00000630472 1889 ntBASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 RBM7-209ENST00000624815 3587 ntTSL 3 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 PTAFR-201ENST00000305392 1539 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 COL3A1-202ENST00000317840 3873 ntTSL 2 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 MAPK10-319ENST00000641459 2542 ntBASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 AKAP1-204ENST00000539273 3153 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 BNC2-210ENST00000545497 3750 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 ICE2-213ENST00000561114 3796 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 P4HA1-202ENST00000307116 2727 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 ZNF17-201ENST00000307658 2716 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 P4HA1-203ENST00000373008 2727 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 TRIM10-203ENST00000376704 3007 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 RPS6KA1-216ENST00000530003 3023 ntTSL 5 BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 NEDD4L-206ENST00000431212 3338 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 COMMD9-201ENST00000263401 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 SLC4A1AP-201ENST00000326019 2959 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 RAB29-202ENST00000367139 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 SRGAP2-215ENST00000605610 3212 ntTSL 2 BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 PDSS2-202ENST00000369037 3540 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 AC091544.5-201ENST00000620192 3815 ntBASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 METTL15-203ENST00000406787 4304 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 GUCY1B3-201ENST00000264424 3124 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 KLF17-201ENST00000372299 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms