RNA–Protein interactions for RNA: ENST00000516888.1

RN7SKP209-201, Transcript of RNA, 7SK small nuclear pseudogene 209, humanhuman

BASIC

Gene RN7SKP209, Length 304 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP209-201ENST00000516888 AEBP2Q6ZN18 517 aaPredicted RBP11.87□□□□□ -0.51
RN7SKP209-201ENST00000516888 CHIC1Q5VXU3 224 aa11.14□□□□□ -0.63
RN7SKP209-201ENST00000516888 SENP3Q9H4L4 574 aaPredicted RBP10.21□□□□□ -0.77
RN7SKP209-201ENST00000516888 PHF23Q9BUL5 403 aaPredicted RBP10.01□□□□□ -0.81
RN7SKP209-201ENST00000516888 FOXD1Q16676 465 aa9.52□□□□□ -0.89
RN7SKP209-201ENST00000516888 POTEDQ86YR6 584 aa9.28□□□□□ -0.92
RN7SKP209-201ENST00000516888 MSH5O43196 834 aa9.05□□□□□ -0.96
RN7SKP209-201ENST00000516888 PIAS4Q8N2W9 510 aaPredicted RBP8.85□□□□□ -0.99
RN7SKP209-201ENST00000516888 PLPPR3Q6T4P5 718 aa8.71□□□□□ -1.02
RN7SKP209-201ENST00000516888 PPP6R1Q9UPN7 881 aa8.67□□□□□ -1.02
RN7SKP209-201ENST00000516888 ADRA2BP18089 450 aa8.63□□□□□ -1.03
RN7SKP209-201ENST00000516888 NISCHQ9Y2I1 1504 aa8.16□□□□□ -1.1
RN7SKP209-201ENST00000516888 DMRT2Q9Y5R5 561 aa8.04□□□□□ -1.12
RN7SKP209-201ENST00000516888 MAPK8IP2Q13387 824 aaPredicted RBP8□□□□□ -1.13
RN7SKP209-201ENST00000516888 SCAF1Q9H7N4 1312 aaKnown RBP7.94□□□□□ -1.14
RN7SKP209-201ENST00000516888 CACNB1Q02641 598 aaPredicted RBP7.92□□□□□ -1.14
RN7SKP209-201ENST00000516888 DCAF8L1A6NGE4 600 aa7.72□□□□□ -1.17
RN7SKP209-201ENST00000516888 RNF39Q9H2S5 420 aa7.68□□□□□ -1.18
RN7SKP209-201ENST00000516888 HOXD11P31277 338 aaPredicted RBP7.64□□□□□ -1.19
RN7SKP209-201ENST00000516888 C1QBPQ07021 282 aaKnown RBP7.57□□□□□ -1.2
RN7SKP209-201ENST00000516888 PPP4R3CPQ6ZMV5 832 aa7.57□□□□□ -1.2
RN7SKP209-201ENST00000516888 RNF216Q9NWF9 866 aaPredicted RBP7.52□□□□□ -1.21
RN7SKP209-201ENST00000516888 CNKSR2Q8WXI2 1034 aa7.51□□□□□ -1.21
RN7SKP209-201ENST00000516888 DNAJC5BQ9UF47 199 aa7.46□□□□□ -1.22
RN7SKP209-201ENST00000516888 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.27□□□□□ -1.25
RN7SKP209-201ENST00000516888 NCBP3Q53F19 620 aaKnown RBP7.22□□□□□ -1.25
RN7SKP209-201ENST00000516888 POTEHQ6S545 545 aa7.22□□□□□ -1.25
RN7SKP209-201ENST00000516888 CCDC180Q9P1Z9 1646 aa7.16□□□□□ -1.26
RN7SKP209-201ENST00000516888 NPM3O75607 178 aaKnown RBP7.09□□□□□ -1.27
RN7SKP209-201ENST00000516888 DSG3P32926 999 aa7.09□□□□□ -1.27
RN7SKP209-201ENST00000516888 U3KPZ7 1027 aaPredicted RBP7.09□□□□□ -1.27
RN7SKP209-201ENST00000516888 CAPN15O75808 1086 aa7.07□□□□□ -1.28
RN7SKP209-201ENST00000516888 SPINK5Q9NQ38 1064 aaPredicted RBP7.06□□□□□ -1.28
RN7SKP209-201ENST00000516888 APLP2Q06481 763 aa6.91□□□□□ -1.3
RN7SKP209-201ENST00000516888 ZNF219Q9P2Y4 722 aaPredicted RBP6.9□□□□□ -1.3
RN7SKP209-201ENST00000516888 ZCCHC6Q5VYS8 1495 aaKnown RBP6.89□□□□□ -1.31
RN7SKP209-201ENST00000516888 TRHP20396 242 aaPredicted RBP6.88□□□□□ -1.31
RN7SKP209-201ENST00000516888 ABCB7O75027 752 aa6.87□□□□□ -1.31
RN7SKP209-201ENST00000516888 DCAF1Q9Y4B6 1507 aa6.85□□□□□ -1.31
RN7SKP209-201ENST00000516888 SLC4A2P04920 1241 aa6.84□□□□□ -1.31
RN7SKP209-201ENST00000516888 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.82□□□□□ -1.32
RN7SKP209-201ENST00000516888 HNRNPUL2Q1KMD3 747 aaKnown RBP6.82□□□□□ -1.32
RN7SKP209-201ENST00000516888 RBM42Q9BTD8 480 aaKnown RBP6.81□□□□□ -1.32
RN7SKP209-201ENST00000516888 SAMD1Q6SPF0 538 aaPredicted RBP6.76□□□□□ -1.33
RN7SKP209-201ENST00000516888 MYO15BQ96JP2 1530 aa6.76□□□□□ -1.33
RN7SKP209-201ENST00000516888 CHRDL2Q6WN34 429 aa6.74□□□□□ -1.33
RN7SKP209-201ENST00000516888 KCNA4P22459 653 aa6.7□□□□□ -1.34
RN7SKP209-201ENST00000516888 SP7Q8TDD2 431 aaPredicted RBP6.65□□□□□ -1.34
RN7SKP209-201ENST00000516888 POLA2Q14181 598 aa6.63□□□□□ -1.35
RN7SKP209-201ENST00000516888 NACADO15069 1562 aa6.62□□□□□ -1.35
RN7SKP209-201ENST00000516888 MYCNP04198 464 aaPredicted RBP6.59□□□□□ -1.35
RN7SKP209-201ENST00000516888 AKT1S1Q96B36 256 aa6.58□□□□□ -1.36
RN7SKP209-201ENST00000516888 SHROOM4Q9ULL8 1493 aa6.58□□□□□ -1.36
RN7SKP209-201ENST00000516888 DCAF8L2P0C7V8 631 aa6.57□□□□□ -1.36
RN7SKP209-201ENST00000516888 PIP4P2Q8N4L2 257 aa6.52□□□□□ -1.37
RN7SKP209-201ENST00000516888 ZBTB12Q9Y330 459 aaPredicted RBP6.52□□□□□ -1.37
RN7SKP209-201ENST00000516888 RB1CC1Q8TDY2 1594 aa6.52□□□□□ -1.37
RN7SKP209-201ENST00000516888 REM2Q8IYK8 340 aaPredicted RBP6.5□□□□□ -1.37
RN7SKP209-201ENST00000516888 ABCC9O60706 1549 aa6.49□□□□□ -1.37
RN7SKP209-201ENST00000516888 HAX1O00165 279 aa6.47□□□□□ -1.37
RN7SKP209-201ENST00000516888 FXR2P51116 673 aaKnown RBP eCLIP6.45□□□□□ -1.38
RN7SKP209-201ENST00000516888 SCRIBQ14160 1630 aa6.45□□□□□ -1.38
RN7SKP209-201ENST00000516888 PITPNM1O00562 1244 aa6.44□□□□□ -1.38
RN7SKP209-201ENST00000516888 OSCARQ8IYS5 282 aa6.44□□□□□ -1.38
RN7SKP209-201ENST00000516888 SUPT5HO00267 1087 aaKnown RBP6.42□□□□□ -1.38
RN7SKP209-201ENST00000516888 ATF5Q9Y2D1 282 aaPredicted RBP6.42□□□□□ -1.38
RN7SKP209-201ENST00000516888 FOXD4L1Q9NU39 408 aa6.37□□□□□ -1.39
RN7SKP209-201ENST00000516888 EVX2Q03828 476 aa6.35□□□□□ -1.39
RN7SKP209-201ENST00000516888 BAZ1AQ9NRL2 1556 aaPredicted RBP6.35□□□□□ -1.39
RN7SKP209-201ENST00000516888 RSF1Q96T23 1441 aaPredicted RBP6.33□□□□□ -1.4
RN7SKP209-201ENST00000516888 UNC13AQ9UPW8 1703 aa6.3□□□□□ -1.4
RN7SKP209-201ENST00000516888 SPDYE2BA6NHP3 402 aa6.29□□□□□ -1.4
RN7SKP209-201ENST00000516888 SPDYE6P0CI01 402 aa6.29□□□□□ -1.4
RN7SKP209-201ENST00000516888 SPDYE2Q495Y8 402 aa6.29□□□□□ -1.4
RN7SKP209-201ENST00000516888 SLC4A1APQ9BWU0 796 aaKnown RBP6.28□□□□□ -1.4
RN7SKP209-201ENST00000516888 PRKAR2AP13861 404 aaKnown RBP6.27□□□□□ -1.41
RN7SKP209-201ENST00000516888 SMARCA4P51532 1647 aa6.25□□□□□ -1.41
RN7SKP209-201ENST00000516888 MROH2BQ7Z745 1585 aa6.24□□□□□ -1.41
RN7SKP209-201ENST00000516888 C19orf67A6NJJ6 358 aa6.24□□□□□ -1.41
RN7SKP209-201ENST00000516888 SPDYE1Q8NFV5 336 aaPredicted RBP6.24□□□□□ -1.41
RN7SKP209-201ENST00000516888 FBLN2P98095 1184 aa6.23□□□□□ -1.41
RN7SKP209-201ENST00000516888 LHX8Q68G74 356 aa6.23□□□□□ -1.41
RN7SKP209-201ENST00000516888 CLEC11AQ9Y240 323 aa6.23□□□□□ -1.41
RN7SKP209-201ENST00000516888 PEG3Q9GZU2 1588 aa6.23□□□□□ -1.41
RN7SKP209-201ENST00000516888 CECR2Q9BXF3 1484 aa6.22□□□□□ -1.41
RN7SKP209-201ENST00000516888 TOP2AP11388 1531 aaKnown RBP6.22□□□□□ -1.41
RN7SKP209-201ENST00000516888 BICRAQ9NZM4 1560 aa6.22□□□□□ -1.41
RN7SKP209-201ENST00000516888 GABBR2O75899 941 aa6.21□□□□□ -1.42
RN7SKP209-201ENST00000516888 WIZO95785 1651 aa6.2□□□□□ -1.42
RN7SKP209-201ENST00000516888 ATXN8OSP0DMR3 200 aa6.2□□□□□ -1.42
RN7SKP209-201ENST00000516888 SMARCA2P51531 1590 aa6.18□□□□□ -1.42
RN7SKP209-201ENST00000516888 SSUH2Q9Y2M2 353 aa6.16□□□□□ -1.42
RN7SKP209-201ENST00000516888 ZNF692Q9BU19 519 aaPredicted RBP6.15□□□□□ -1.42
RN7SKP209-201ENST00000516888 ZBTB22O15209 634 aa6.14□□□□□ -1.43
RN7SKP209-201ENST00000516888 CHADLQ6NUI6 762 aa6.13□□□□□ -1.43
RN7SKP209-201ENST00000516888 EIF4G1Q04637 1599 aaKnown RBP6.12□□□□□ -1.43
RN7SKP209-201ENST00000516888 TRIM41Q8WV44 630 aa6.12□□□□□ -1.43
RN7SKP209-201ENST00000516888 HMGXB3Q12766 1538 aa6.11□□□□□ -1.43
RN7SKP209-201ENST00000516888 MKRN4PQ13434 485 aaPredicted RBP6.11□□□□□ -1.43
RN7SKP209-201ENST00000516888 BAZ1BQ9UIG0 1483 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms