RNA–Protein interactions for RNA: ENST00000292303.4

CCR5-201, Transcript of C-C motif chemokine receptor 5 (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCR5, Length 3,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR5-201ENST00000292303 AEBP2Q6ZN18 517 aaPredicted RBP12.17□□□□□ -0.46
CCR5-201ENST00000292303 CHIC1Q5VXU3 224 aa11.93□□□□□ -0.5
CCR5-201ENST00000292303 NISCHQ9Y2I1 1504 aa11.92□□□□□ -0.5
CCR5-201ENST00000292303 PHF23Q9BUL5 403 aaPredicted RBP10.52□□□□□ -0.73
CCR5-201ENST00000292303 DCAF8L2P0C7V8 631 aa10.38□□□□□ -0.75
CCR5-201ENST00000292303 CCDC180Q9P1Z9 1646 aa10.36□□□□□ -0.75
CCR5-201ENST00000292303 SHROOM4Q9ULL8 1493 aa10.31□□□□□ -0.76
CCR5-201ENST00000292303 SENP3Q9H4L4 574 aaPredicted RBP10.31□□□□□ -0.76
CCR5-201ENST00000292303 SUPT5HO00267 1087 aaKnown RBP10.17□□□□□ -0.78
CCR5-201ENST00000292303 ZCCHC6Q5VYS8 1495 aaKnown RBP10.07□□□□□ -0.8
CCR5-201ENST00000292303 EHMT2Q96KQ7 1210 aa9.85□□□□□ -0.83
CCR5-201ENST00000292303 PLPPR3Q6T4P5 718 aa9.79□□□□□ -0.84
CCR5-201ENST00000292303 MYO15BQ96JP2 1530 aa9.75□□□□□ -0.85
CCR5-201ENST00000292303 DCAF1Q9Y4B6 1507 aa9.72□□□□□ -0.85
CCR5-201ENST00000292303 NACADO15069 1562 aa9.63□□□□□ -0.87
CCR5-201ENST00000292303 RB1CC1Q8TDY2 1594 aa9.61□□□□□ -0.87
CCR5-201ENST00000292303 PELP1Q8IZL8 1130 aaKnown RBP9.59□□□□□ -0.87
CCR5-201ENST00000292303 FOXD1Q16676 465 aa9.58□□□□□ -0.88
CCR5-201ENST00000292303 FAM9AQ8IZU1 332 aaPredicted RBP9.57□□□□□ -0.88
CCR5-201ENST00000292303 ABCC9O60706 1549 aa9.55□□□□□ -0.88
CCR5-201ENST00000292303 SCRIBQ14160 1630 aa9.54□□□□□ -0.88
CCR5-201ENST00000292303 PPARGC1BQ86YN6 1023 aaKnown RBP9.52□□□□□ -0.89
CCR5-201ENST00000292303 LOC105371045A0A1W2PR82 267 aa9.49□□□□□ -0.89
CCR5-201ENST00000292303 PCGF6Q9BYE7 350 aa9.49□□□□□ -0.89
CCR5-201ENST00000292303 HRCP23327 699 aa9.46□□□□□ -0.9
CCR5-201ENST00000292303 RSF1Q96T23 1441 aaPredicted RBP9.45□□□□□ -0.9
CCR5-201ENST00000292303 TTBK1Q5TCY1 1321 aaPredicted RBP9.44□□□□□ -0.9
CCR5-201ENST00000292303 ADRA2BP18089 450 aa9.41□□□□□ -0.9
CCR5-201ENST00000292303 SLC24A1O60721 1099 aa9.39□□□□□ -0.91
CCR5-201ENST00000292303 CECR2Q9BXF3 1484 aa9.36□□□□□ -0.91
CCR5-201ENST00000292303 UNC13AQ9UPW8 1703 aa9.35□□□□□ -0.91
CCR5-201ENST00000292303 PPP6R1Q9UPN7 881 aa9.34□□□□□ -0.91
CCR5-201ENST00000292303 MROH2BQ7Z745 1585 aa9.31□□□□□ -0.92
CCR5-201ENST00000292303 TRIM41Q8WV44 630 aa9.29□□□□□ -0.92
CCR5-201ENST00000292303 MYT1Q01538 1121 aa9.28□□□□□ -0.92
CCR5-201ENST00000292303 WIZO95785 1651 aa9.27□□□□□ -0.93
CCR5-201ENST00000292303 RANGAP1P46060 587 aaPredicted RBP9.24□□□□□ -0.93
CCR5-201ENST00000292303 SCAF1Q9H7N4 1312 aaKnown RBP9.23□□□□□ -0.93
CCR5-201ENST00000292303 BICRAQ9NZM4 1560 aa9.21□□□□□ -0.93
CCR5-201ENST00000292303 PIAS4Q8N2W9 510 aaPredicted RBP9.19□□□□□ -0.94
CCR5-201ENST00000292303 TRIM26Q12899 539 aaPredicted RBP9.18□□□□□ -0.94
CCR5-201ENST00000292303 BAZ1AQ9NRL2 1556 aaPredicted RBP9.15□□□□□ -0.95
CCR5-201ENST00000292303 EIF4G1Q04637 1599 aaKnown RBP9.11□□□□□ -0.95
CCR5-201ENST00000292303 PABPN1Q86U42 306 aaKnown RBP eCLIP9.1□□□□□ -0.95
CCR5-201ENST00000292303 SMARCA4P51532 1647 aa9.09□□□□□ -0.95
CCR5-201ENST00000292303 ABCC8Q09428 1581 aa9.07□□□□□ -0.96
CCR5-201ENST00000292303 CCDC88BA6NC98 1476 aa9.06□□□□□ -0.96
CCR5-201ENST00000292303 TOP2AP11388 1531 aaKnown RBP9.06□□□□□ -0.96
CCR5-201ENST00000292303 SMARCA2P51531 1590 aa9.04□□□□□ -0.96
CCR5-201ENST00000292303 SOGA1O94964 1423 aa8.98□□□□□ -0.97
CCR5-201ENST00000292303 RUSC2Q8N2Y8 1516 aa8.96□□□□□ -0.98
CCR5-201ENST00000292303 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.95□□□□□ -0.98
CCR5-201ENST00000292303 GTF3C3Q9Y5Q9 886 aa8.95□□□□□ -0.98
CCR5-201ENST00000292303 UBTFP17480 764 aaKnown RBP8.94□□□□□ -0.98
CCR5-201ENST00000292303 ZEB1P37275 1124 aaPredicted RBP8.93□□□□□ -0.98
CCR5-201ENST00000292303 BCL11AQ9H165 835 aa8.93□□□□□ -0.98
CCR5-201ENST00000292303 CC2D2AQ9P2K1 1620 aa8.92□□□□□ -0.98
CCR5-201ENST00000292303 PEG3Q9GZU2 1588 aa8.88□□□□□ -0.99
CCR5-201ENST00000292303 CEP162Q5TB80 1403 aa8.88□□□□□ -0.99
CCR5-201ENST00000292303 PRKCSHP14314 528 aaPredicted RBP8.88□□□□□ -0.99
CCR5-201ENST00000292303 CCER1Q8TC90 406 aaPredicted RBP8.88□□□□□ -0.99
CCR5-201ENST00000292303 NEUROD1Q13562 356 aa8.88□□□□□ -0.99
CCR5-201ENST00000292303 CSRNP3Q8WYN3 585 aa8.88□□□□□ -0.99
CCR5-201ENST00000292303 ATAD2BQ9ULI0 1458 aa8.86□□□□□ -0.99
CCR5-201ENST00000292303 WRNQ14191 1432 aaPredicted RBP eCLIP8.85□□□□□ -0.99
CCR5-201ENST00000292303 SYNJ1O43426 1573 aa8.85□□□□□ -0.99
CCR5-201ENST00000292303 TNIKQ9UKE5 1360 aa8.85□□□□□ -0.99
CCR5-201ENST00000292303 HMGXB3Q12766 1538 aa8.84□□□□□ -0.99
CCR5-201ENST00000292303 HNRNPUL2Q1KMD3 747 aaKnown RBP8.82□□□□□ -1
CCR5-201ENST00000292303 ACIN1Q9UKV3 1341 aaKnown RBP8.82□□□□□ -1
CCR5-201ENST00000292303 YTHDC1Q96MU7 727 aaKnown RBP8.82□□□□□ -1
CCR5-201ENST00000292303 BAZ1BQ9UIG0 1483 aaKnown RBP8.81□□□□□ -1
CCR5-201ENST00000292303 EEA1Q15075 1411 aa8.8□□□□□ -1
CCR5-201ENST00000292303 CENPBP07199 599 aaPredicted RBP8.79□□□□□ -1
CCR5-201ENST00000292303 GOLGA3Q08378 1498 aa8.79□□□□□ -1
CCR5-201ENST00000292303 ITGAEP38570 1179 aa8.78□□□□□ -1
CCR5-201ENST00000292303 ATP1B4Q9UN42 357 aaPredicted RBP8.78□□□□□ -1
CCR5-201ENST00000292303 CUX2O14529 1486 aa8.77□□□□□ -1.01
CCR5-201ENST00000292303 DNAJC5BQ9UF47 199 aa8.77□□□□□ -1.01
CCR5-201ENST00000292303 NCAPD3P42695 1498 aa8.75□□□□□ -1.01
CCR5-201ENST00000292303 MSH5O43196 834 aa8.75□□□□□ -1.01
CCR5-201ENST00000292303 RAPGEF2Q9Y4G8 1499 aa8.74□□□□□ -1.01
CCR5-201ENST00000292303 CEP164Q9UPV0 1460 aa8.73□□□□□ -1.01
CCR5-201ENST00000292303 KIF21BO75037 1637 aa8.73□□□□□ -1.01
CCR5-201ENST00000292303 CLIP1P30622 1438 aa8.71□□□□□ -1.01
CCR5-201ENST00000292303 TOP2BQ02880 1626 aa8.71□□□□□ -1.02
CCR5-201ENST00000292303 APLP2Q06481 763 aa8.7□□□□□ -1.02
CCR5-201ENST00000292303 PPP4R3CPQ6ZMV5 832 aa8.68□□□□□ -1.02
CCR5-201ENST00000292303 BIVM-ERCC5R4GMW8 1640 aa8.67□□□□□ -1.02
CCR5-201ENST00000292303 DAXXQ9UER7 740 aaPredicted RBP8.67□□□□□ -1.02
CCR5-201ENST00000292303 VPS8Q8N3P4 1428 aa8.66□□□□□ -1.02
CCR5-201ENST00000292303 LAMC3Q9Y6N6 1575 aa8.66□□□□□ -1.02
CCR5-201ENST00000292303 CUX1P39880 1505 aa8.65□□□□□ -1.02
CCR5-201ENST00000292303 KCNA4P22459 653 aa8.64□□□□□ -1.03
CCR5-201ENST00000292303 DIEXFQ68CQ4 756 aaKnown RBP8.64□□□□□ -1.03
CCR5-201ENST00000292303 PRXQ9BXM0 1461 aa8.62□□□□□ -1.03
CCR5-201ENST00000292303 P3H3Q8IVL6 736 aa8.62□□□□□ -1.03
CCR5-201ENST00000292303 PRDM2Q13029 1718 aa8.61□□□□□ -1.03
CCR5-201ENST00000292303 CFTRP13569 1480 aa8.6□□□□□ -1.03
CCR5-201ENST00000292303 ARAP1Q96P48 1450 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms