RNA–Protein interactions for RNA: ENST00000530003.5

RPS6KA1-216, Transcript of ribosomal protein S6 kinase A1, humanhuman

TSL 5 BASIC

Gene RPS6KA1, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KA1-216ENST00000530003 NISCHQ9Y2I1 1504 aa21.12■□□□□ 0.97
RPS6KA1-216ENST00000530003 SHROOM4Q9ULL8 1493 aa18.58■□□□□ 0.57
RPS6KA1-216ENST00000530003 SUPT5HO00267 1087 aaKnown RBP18.24■□□□□ 0.51
RPS6KA1-216ENST00000530003 DCAF8L2P0C7V8 631 aa18.21■□□□□ 0.51
RPS6KA1-216ENST00000530003 CCDC180Q9P1Z9 1646 aa18.06■□□□□ 0.48
RPS6KA1-216ENST00000530003 ZCCHC6Q5VYS8 1495 aaKnown RBP17.74■□□□□ 0.43
RPS6KA1-216ENST00000530003 ABCC9O60706 1549 aa17.63■□□□□ 0.41
RPS6KA1-216ENST00000530003 CHIC1Q5VXU3 224 aa17.5■□□□□ 0.39
RPS6KA1-216ENST00000530003 MYO15BQ96JP2 1530 aa17.47■□□□□ 0.39
RPS6KA1-216ENST00000530003 PCGF6Q9BYE7 350 aa17.25■□□□□ 0.35
RPS6KA1-216ENST00000530003 LOC105371045A0A1W2PR82 267 aa17.22■□□□□ 0.35
RPS6KA1-216ENST00000530003 DCAF1Q9Y4B6 1507 aa17.16■□□□□ 0.34
RPS6KA1-216ENST00000530003 SCRIBQ14160 1630 aa17.11■□□□□ 0.33
RPS6KA1-216ENST00000530003 EHMT2Q96KQ7 1210 aa17.06■□□□□ 0.32
RPS6KA1-216ENST00000530003 HRCP23327 699 aa17.05■□□□□ 0.32
RPS6KA1-216ENST00000530003 PPARGC1BQ86YN6 1023 aaKnown RBP17.03■□□□□ 0.32
RPS6KA1-216ENST00000530003 FAM9AQ8IZU1 332 aaPredicted RBP16.96■□□□□ 0.3
RPS6KA1-216ENST00000530003 NACADO15069 1562 aa16.94■□□□□ 0.3
RPS6KA1-216ENST00000530003 PABPN1Q86U42 306 aaKnown RBP eCLIP16.86■□□□□ 0.29
RPS6KA1-216ENST00000530003 RB1CC1Q8TDY2 1594 aa16.85■□□□□ 0.29
RPS6KA1-216ENST00000530003 TRIM41Q8WV44 630 aa16.79■□□□□ 0.28
RPS6KA1-216ENST00000530003 RSF1Q96T23 1441 aaPredicted RBP16.77■□□□□ 0.27
RPS6KA1-216ENST00000530003 CECR2Q9BXF3 1484 aa16.63■□□□□ 0.25
RPS6KA1-216ENST00000530003 TRIM26Q12899 539 aaPredicted RBP16.62■□□□□ 0.25
RPS6KA1-216ENST00000530003 MROH2BQ7Z745 1585 aa16.48■□□□□ 0.23
RPS6KA1-216ENST00000530003 TTBK1Q5TCY1 1321 aaPredicted RBP16.47■□□□□ 0.23
RPS6KA1-216ENST00000530003 UNC13AQ9UPW8 1703 aa16.45■□□□□ 0.22
RPS6KA1-216ENST00000530003 PELP1Q8IZL8 1130 aaKnown RBP16.42■□□□□ 0.22
RPS6KA1-216ENST00000530003 WIZO95785 1651 aa16.39■□□□□ 0.21
RPS6KA1-216ENST00000530003 BICRAQ9NZM4 1560 aa16.35■□□□□ 0.21
RPS6KA1-216ENST00000530003 BAZ1AQ9NRL2 1556 aaPredicted RBP16.26■□□□□ 0.19
RPS6KA1-216ENST00000530003 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.24■□□□□ 0.19
RPS6KA1-216ENST00000530003 SMARCA4P51532 1647 aa16.18■□□□□ 0.18
RPS6KA1-216ENST00000530003 ABCC8Q09428 1581 aa16.18■□□□□ 0.18
RPS6KA1-216ENST00000530003 ZEB1P37275 1124 aaPredicted RBP16.13■□□□□ 0.17
RPS6KA1-216ENST00000530003 CCER1Q8TC90 406 aaPredicted RBP16.11■□□□□ 0.17
RPS6KA1-216ENST00000530003 CCDC88BA6NC98 1476 aa16.1■□□□□ 0.17
RPS6KA1-216ENST00000530003 UBTFP17480 764 aaKnown RBP16.07■□□□□ 0.16
RPS6KA1-216ENST00000530003 RANGAP1P46060 587 aaPredicted RBP16.06■□□□□ 0.16
RPS6KA1-216ENST00000530003 SOGA1O94964 1423 aa16.05■□□□□ 0.16
RPS6KA1-216ENST00000530003 RUSC2Q8N2Y8 1516 aa16■□□□□ 0.15
RPS6KA1-216ENST00000530003 TOP2AP11388 1531 aaKnown RBP15.98■□□□□ 0.15
RPS6KA1-216ENST00000530003 ATAD2BQ9ULI0 1458 aa15.98■□□□□ 0.15
RPS6KA1-216ENST00000530003 BAZ1BQ9UIG0 1483 aaKnown RBP15.96■□□□□ 0.15
RPS6KA1-216ENST00000530003 EIF4G1Q04637 1599 aaKnown RBP15.95■□□□□ 0.14
RPS6KA1-216ENST00000530003 MYT1Q01538 1121 aa15.94■□□□□ 0.14
RPS6KA1-216ENST00000530003 SMARCA2P51531 1590 aa15.94■□□□□ 0.14
RPS6KA1-216ENST00000530003 CEP162Q5TB80 1403 aa15.93■□□□□ 0.14
RPS6KA1-216ENST00000530003 CSRNP3Q8WYN3 585 aa15.92■□□□□ 0.14
RPS6KA1-216ENST00000530003 SCAF1Q9H7N4 1312 aaKnown RBP15.88■□□□□ 0.13
RPS6KA1-216ENST00000530003 HNRNPUL2Q1KMD3 747 aaKnown RBP15.85■□□□□ 0.13
RPS6KA1-216ENST00000530003 WRNQ14191 1432 aaPredicted RBP eCLIP15.78■□□□□ 0.12
RPS6KA1-216ENST00000530003 TNIKQ9UKE5 1360 aa15.77■□□□□ 0.12
RPS6KA1-216ENST00000530003 PEG3Q9GZU2 1588 aa15.77■□□□□ 0.11
RPS6KA1-216ENST00000530003 DIEXFQ68CQ4 756 aaKnown RBP15.76■□□□□ 0.11
RPS6KA1-216ENST00000530003 NCAPD3P42695 1498 aa15.72■□□□□ 0.11
RPS6KA1-216ENST00000530003 DNAJC5BQ9UF47 199 aa15.72■□□□□ 0.11
RPS6KA1-216ENST00000530003 NEUROD1Q13562 356 aa15.71■□□□□ 0.11
RPS6KA1-216ENST00000530003 CC2D2AQ9P2K1 1620 aa15.71■□□□□ 0.1
RPS6KA1-216ENST00000530003 GOLGA3Q08378 1498 aa15.68■□□□□ 0.1
RPS6KA1-216ENST00000530003 YTHDC1Q96MU7 727 aaKnown RBP15.68■□□□□ 0.1
RPS6KA1-216ENST00000530003 SYNJ1O43426 1573 aa15.67■□□□□ 0.1
RPS6KA1-216ENST00000530003 APLP2Q06481 763 aa15.64■□□□□ 0.09
RPS6KA1-216ENST00000530003 CLIP1P30622 1438 aa15.62■□□□□ 0.09
RPS6KA1-216ENST00000530003 EEA1Q15075 1411 aa15.62■□□□□ 0.09
RPS6KA1-216ENST00000530003 ACIN1Q9UKV3 1341 aaKnown RBP15.6■□□□□ 0.09
RPS6KA1-216ENST00000530003 HMGXB3Q12766 1538 aa15.6■□□□□ 0.09
RPS6KA1-216ENST00000530003 RAPGEF2Q9Y4G8 1499 aa15.6■□□□□ 0.09
RPS6KA1-216ENST00000530003 GTF3C3Q9Y5Q9 886 aa15.57■□□□□ 0.08
RPS6KA1-216ENST00000530003 CEP164Q9UPV0 1460 aa15.56■□□□□ 0.08
RPS6KA1-216ENST00000530003 ZNF316A6NFI3 1004 aaPredicted RBP15.53■□□□□ 0.08
RPS6KA1-216ENST00000530003 ITGAEP38570 1179 aa15.51■□□□□ 0.07
RPS6KA1-216ENST00000530003 CADPSQ9ULU8 1353 aa15.48■□□□□ 0.07
RPS6KA1-216ENST00000530003 NESP48681 1621 aa15.47■□□□□ 0.07
RPS6KA1-216ENST00000530003 CENPBP07199 599 aaPredicted RBP15.47■□□□□ 0.07
RPS6KA1-216ENST00000530003 VPS8Q8N3P4 1428 aa15.47■□□□□ 0.07
RPS6KA1-216ENST00000530003 MIER1Q8N108 512 aa15.46■□□□□ 0.07
RPS6KA1-216ENST00000530003 KANK4Q5T7N3 995 aaPredicted RBP15.46■□□□□ 0.07
RPS6KA1-216ENST00000530003 CFTRP13569 1480 aa15.44■□□□□ 0.06
RPS6KA1-216ENST00000530003 KIF21BO75037 1637 aa15.41■□□□□ 0.06
RPS6KA1-216ENST00000530003 ATP1B4Q9UN42 357 aaPredicted RBP15.34■□□□□ 0.05
RPS6KA1-216ENST00000530003 CUX1P39880 1505 aa15.34■□□□□ 0.05
RPS6KA1-216ENST00000530003 FANCD2Q9BXW9 1451 aa15.33■□□□□ 0.04
RPS6KA1-216ENST00000530003 P3H3Q8IVL6 736 aa15.33■□□□□ 0.04
RPS6KA1-216ENST00000530003 TOP2BQ02880 1626 aa15.32■□□□□ 0.04
RPS6KA1-216ENST00000530003 ARAP1Q96P48 1450 aa15.29■□□□□ 0.04
RPS6KA1-216ENST00000530003 PRXQ9BXM0 1461 aa15.25■□□□□ 0.03
RPS6KA1-216ENST00000530003 KIF27Q86VH2 1401 aa15.24■□□□□ 0.03
RPS6KA1-216ENST00000530003 DHX57Q6P158 1386 aaKnown RBP15.23■□□□□ 0.03
RPS6KA1-216ENST00000530003 CUX2O14529 1486 aa15.22■□□□□ 0.03
RPS6KA1-216ENST00000530003 FGD5Q6ZNL6 1462 aa15.21■□□□□ 0.03
RPS6KA1-216ENST00000530003 RAD54L2Q9Y4B4 1467 aa15.2■□□□□ 0.02
RPS6KA1-216ENST00000530003 BIVM-ERCC5R4GMW8 1640 aa15.19■□□□□ 0.02
RPS6KA1-216ENST00000530003 FAM50AQ14320 339 aaKnown RBP15.18■□□□□ 0.02
RPS6KA1-216ENST00000530003 PDS5BQ9NTI5 1447 aa15.18■□□□□ 0.02
RPS6KA1-216ENST00000530003 ARHGAP35Q9NRY4 1499 aa15.16■□□□□ 0.02
RPS6KA1-216ENST00000530003 ERICH3Q5RHP9 1530 aa15.14■□□□□ 0.01
RPS6KA1-216ENST00000530003 TDRD9Q8NDG6 1382 aaKnown RBP15.13■□□□□ 0.01
RPS6KA1-216ENST00000530003 CCNB3Q8WWL7 1395 aa15.13■□□□□ 0.01
RPS6KA1-216ENST00000530003 TOPBP1Q92547 1522 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms