Protein–RNA interactions for Protein: S4R3C0

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S4R3C0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
S4R3C0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.4■□□□□ 0.06
S4R3C0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
S4R3C0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC15.4■□□□□ 0.06
S4R3C0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
S4R3C0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
S4R3C0 TREX1-205ENST00000625293 1783 ntBASIC15.4■□□□□ 0.06
S4R3C0 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
S4R3C0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
S4R3C0 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC15.4■□□□□ 0.06
S4R3C0 PNMA6B-201ENST00000538162 1200 ntBASIC15.4■□□□□ 0.06
S4R3C0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC15.4■□□□□ 0.06
S4R3C0 AC142086.2-201ENST00000569753 217 ntBASIC15.4■□□□□ 0.06
S4R3C0 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
S4R3C0 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
S4R3C0 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
S4R3C0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
S4R3C0 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
S4R3C0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
S4R3C0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
S4R3C0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
S4R3C0 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC15.4■□□□□ 0.06
S4R3C0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
S4R3C0 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
S4R3C0 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
S4R3C0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
S4R3C0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
S4R3C0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
S4R3C0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
S4R3C0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
S4R3C0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.39■□□□□ 0.05
S4R3C0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
S4R3C0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
S4R3C0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
S4R3C0 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
S4R3C0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
S4R3C0 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
S4R3C0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
S4R3C0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
S4R3C0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC15.39■□□□□ 0.05
S4R3C0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
S4R3C0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC15.39■□□□□ 0.05
S4R3C0 RPS2P52-201ENST00000469610 820 ntBASIC15.39■□□□□ 0.05
S4R3C0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.39■□□□□ 0.05
S4R3C0 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC15.39■□□□□ 0.05
S4R3C0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC15.39■□□□□ 0.05
S4R3C0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC15.39■□□□□ 0.05
S4R3C0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
S4R3C0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
S4R3C0 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC15.39■□□□□ 0.05
S4R3C0 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC15.39■□□□□ 0.05
S4R3C0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
S4R3C0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC15.39■□□□□ 0.05
S4R3C0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC15.39■□□□□ 0.05
S4R3C0 SOX15-203ENST00000570788 1093 ntBASIC15.39■□□□□ 0.05
S4R3C0 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.39■□□□□ 0.05
S4R3C0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
S4R3C0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
S4R3C0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
S4R3C0 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC15.39■□□□□ 0.05
S4R3C0 AP001271.2-201ENST00000624018 1556 ntBASIC15.39■□□□□ 0.05
S4R3C0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC15.39■□□□□ 0.05
S4R3C0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
S4R3C0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC15.39■□□□□ 0.05
S4R3C0 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
S4R3C0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
S4R3C0 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
S4R3C0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC15.38■□□□□ 0.05
S4R3C0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC15.38■□□□□ 0.05
S4R3C0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
S4R3C0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC15.38■□□□□ 0.05
S4R3C0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
S4R3C0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC15.38■□□□□ 0.05
S4R3C0 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC15.38■□□□□ 0.05
S4R3C0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC15.38■□□□□ 0.05
S4R3C0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.38■□□□□ 0.05
S4R3C0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
S4R3C0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC15.38■□□□□ 0.05
S4R3C0 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC15.38■□□□□ 0.05
S4R3C0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC15.38■□□□□ 0.05
S4R3C0 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC15.38■□□□□ 0.05
S4R3C0 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC15.38■□□□□ 0.05
S4R3C0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
S4R3C0 SLC29A4P2-201ENST00000504749 1089 ntBASIC15.38■□□□□ 0.05
S4R3C0 RNA5SP413-201ENST00000516373 109 ntBASIC15.38■□□□□ 0.05
S4R3C0 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
S4R3C0 AC060766.5-201ENST00000590539 871 ntBASIC15.38■□□□□ 0.05
S4R3C0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC15.38■□□□□ 0.05
S4R3C0 INO80E-214ENST00000620599 515 ntTSL 2 BASIC15.38■□□□□ 0.05
S4R3C0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
S4R3C0 HLA-B-256ENST00000639848 1089 ntBASIC15.38■□□□□ 0.05
S4R3C0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
S4R3C0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
S4R3C0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
S4R3C0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
S4R3C0 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
S4R3C0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
S4R3C0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
S4R3C0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
S4R3C0 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms