Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SPCS1Q9Y6A9 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SPCS1Q9Y6A9 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SPCS1Q9Y6A9 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SPCS1Q9Y6A9 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SPCS1Q9Y6A9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC13.43□□□□□ -0.26
SPCS1Q9Y6A9 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 AP002365.1-201ENST00000603448 772 ntBASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 GATB-213ENST00000515812 1893 ntTSL 5 BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC13.42□□□□□ -0.26
SPCS1Q9Y6A9 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS1Q9Y6A9 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS1Q9Y6A9 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS1Q9Y6A9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS1Q9Y6A9 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
SPCS1Q9Y6A9 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS1Q9Y6A9 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SPCS1Q9Y6A9 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS1Q9Y6A9 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS1Q9Y6A9 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS1Q9Y6A9 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SPCS1Q9Y6A9 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS1Q9Y6A9 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS1Q9Y6A9 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS1Q9Y6A9 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS1Q9Y6A9 STK25-204ENST00000405585 1643 ntTSL 2 BASIC13.41□□□□□ -0.26
SPCS1Q9Y6A9 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS1Q9Y6A9 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SPCS1Q9Y6A9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
SPCS1Q9Y6A9 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS1Q9Y6A9 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
SPCS1Q9Y6A9 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS1Q9Y6A9 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS1Q9Y6A9 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS1Q9Y6A9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS1Q9Y6A9 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS1Q9Y6A9 CD276-201ENST00000318424 2738 ntTSL 5 BASIC13.41□□□□□ -0.26
SPCS1Q9Y6A9 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SPCS1Q9Y6A9 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SPCS1Q9Y6A9 AC063926.3-201ENST00000624734 5658 ntBASIC13.4□□□□□ -0.26
SPCS1Q9Y6A9 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SPCS1Q9Y6A9 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SPCS1Q9Y6A9 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SPCS1Q9Y6A9 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SPCS1Q9Y6A9 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SPCS1Q9Y6A9 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SPCS1Q9Y6A9 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SPCS1Q9Y6A9 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.4□□□□□ -0.26
SPCS1Q9Y6A9 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC13.4□□□□□ -0.26
SPCS1Q9Y6A9 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.4□□□□□ -0.26
SPCS1Q9Y6A9 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
SPCS1Q9Y6A9 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SPCS1Q9Y6A9 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC13.4□□□□□ -0.26
SPCS1Q9Y6A9 AC025884.2-201ENST00000553429 711 ntBASIC13.4□□□□□ -0.26
SPCS1Q9Y6A9 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
SPCS1Q9Y6A9 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SPCS1Q9Y6A9 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SPCS1Q9Y6A9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SPCS1Q9Y6A9 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC13.4□□□□□ -0.26
SPCS1Q9Y6A9 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SPCS1Q9Y6A9 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SPCS1Q9Y6A9 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC13.4□□□□□ -0.26
SPCS1Q9Y6A9 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SPCS1Q9Y6A9 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
SPCS1Q9Y6A9 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
SPCS1Q9Y6A9 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
SPCS1Q9Y6A9 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms