Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC23.18■■□□□ 1.3
CYP46A1Q9Y6A2 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
CYP46A1Q9Y6A2 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC23.17■■□□□ 1.3
CYP46A1Q9Y6A2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
CYP46A1Q9Y6A2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CYP46A1Q9Y6A2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CYP46A1Q9Y6A2 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
CYP46A1Q9Y6A2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CYP46A1Q9Y6A2 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CYP46A1Q9Y6A2 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC23.17■■□□□ 1.3
CYP46A1Q9Y6A2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC23.17■■□□□ 1.3
CYP46A1Q9Y6A2 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CYP46A1Q9Y6A2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC23.17■■□□□ 1.3
CYP46A1Q9Y6A2 AL121906.2-201ENST00000621597 723 ntBASIC23.17■■□□□ 1.3
CYP46A1Q9Y6A2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC23.17■■□□□ 1.3
CYP46A1Q9Y6A2 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC23.17■■□□□ 1.3
CYP46A1Q9Y6A2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC23.17■■□□□ 1.3
CYP46A1Q9Y6A2 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC23.17■■□□□ 1.3
CYP46A1Q9Y6A2 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CYP46A1Q9Y6A2 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC23.16■■□□□ 1.3
CYP46A1Q9Y6A2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC23.16■■□□□ 1.3
CYP46A1Q9Y6A2 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
CYP46A1Q9Y6A2 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CYP46A1Q9Y6A2 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CYP46A1Q9Y6A2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CYP46A1Q9Y6A2 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CYP46A1Q9Y6A2 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CYP46A1Q9Y6A2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
CYP46A1Q9Y6A2 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
CYP46A1Q9Y6A2 PTGES2-AS1-201ENST00000443493 2100 ntBASIC23.16■■□□□ 1.3
CYP46A1Q9Y6A2 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC23.16■■□□□ 1.3
CYP46A1Q9Y6A2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC23.16■■□□□ 1.3
CYP46A1Q9Y6A2 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CYP46A1Q9Y6A2 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CYP46A1Q9Y6A2 AC120498.8-201ENST00000614275 531 ntBASIC23.16■■□□□ 1.3
CYP46A1Q9Y6A2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CYP46A1Q9Y6A2 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC23.16■■□□□ 1.3
CYP46A1Q9Y6A2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC23.16■■□□□ 1.3
CYP46A1Q9Y6A2 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CYP46A1Q9Y6A2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC23.16■■□□□ 1.3
CYP46A1Q9Y6A2 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CYP46A1Q9Y6A2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
CYP46A1Q9Y6A2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CYP46A1Q9Y6A2 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
CYP46A1Q9Y6A2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
CYP46A1Q9Y6A2 AC098818.2-201ENST00000564925 2320 ntBASIC23.15■■□□□ 1.3
CYP46A1Q9Y6A2 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CYP46A1Q9Y6A2 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CYP46A1Q9Y6A2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC23.15■■□□□ 1.3
CYP46A1Q9Y6A2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CYP46A1Q9Y6A2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC23.15■■□□□ 1.3
CYP46A1Q9Y6A2 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CYP46A1Q9Y6A2 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CYP46A1Q9Y6A2 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CYP46A1Q9Y6A2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
CYP46A1Q9Y6A2 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
CYP46A1Q9Y6A2 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC23.15■■□□□ 1.3
CYP46A1Q9Y6A2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CYP46A1Q9Y6A2 SOX15-203ENST00000570788 1093 ntBASIC23.15■■□□□ 1.3
CYP46A1Q9Y6A2 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.15■■□□□ 1.3
CYP46A1Q9Y6A2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
CYP46A1Q9Y6A2 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CYP46A1Q9Y6A2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC23.15■■□□□ 1.3
CYP46A1Q9Y6A2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC23.15■■□□□ 1.3
CYP46A1Q9Y6A2 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC23.15■■□□□ 1.3
CYP46A1Q9Y6A2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC23.15■■□□□ 1.3
CYP46A1Q9Y6A2 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CYP46A1Q9Y6A2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
CYP46A1Q9Y6A2 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CYP46A1Q9Y6A2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CYP46A1Q9Y6A2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC23.15■■□□□ 1.3
CYP46A1Q9Y6A2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CYP46A1Q9Y6A2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CYP46A1Q9Y6A2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC23.14■■□□□ 1.3
CYP46A1Q9Y6A2 AP000974.1-201ENST00000623909 2387 ntBASIC23.14■■□□□ 1.3
CYP46A1Q9Y6A2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CYP46A1Q9Y6A2 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CYP46A1Q9Y6A2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CYP46A1Q9Y6A2 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CYP46A1Q9Y6A2 GOLGA6L3-201ENST00000507199 1679 ntBASIC23.14■■□□□ 1.29
CYP46A1Q9Y6A2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CYP46A1Q9Y6A2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.14■■□□□ 1.29
CYP46A1Q9Y6A2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CYP46A1Q9Y6A2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23.14■■□□□ 1.29
CYP46A1Q9Y6A2 INO80E-214ENST00000620599 515 ntTSL 2 BASIC23.14■■□□□ 1.29
CYP46A1Q9Y6A2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CYP46A1Q9Y6A2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CYP46A1Q9Y6A2 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CYP46A1Q9Y6A2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CYP46A1Q9Y6A2 AP006587.1-201ENST00000534129 1502 ntBASIC23.13■■□□□ 1.29
CYP46A1Q9Y6A2 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CYP46A1Q9Y6A2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CYP46A1Q9Y6A2 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
CYP46A1Q9Y6A2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
CYP46A1Q9Y6A2 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC23.13■■□□□ 1.29
CYP46A1Q9Y6A2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
CYP46A1Q9Y6A2 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC23.13■■□□□ 1.29
CYP46A1Q9Y6A2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CYP46A1Q9Y6A2 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CYP46A1Q9Y6A2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms